RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TRIM25Q14258 630 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PGM2L1Q6PCE3 622 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 LCLAT1Q6UWP7 414 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 AGBL1Q96MI9 1066 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 MRPL40Q9NQ50 206 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ARMCX1Q9P291 453 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SEPT3Q9UH03 358 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ARIH1Q9Y4X5 557 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PRPSAP2O60256 369 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 APOA4P06727 396 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PSMC3P17980 439 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 GNAZP19086 355 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 OSBPP22059 807 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 HMOX2P30519 316 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF33AQ06730 810 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SPP2Q13103 211 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PRKD1Q15139 912 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ADRM1Q16186 407 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 INAQ16352 499 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 RBM44Q6ZP01 1051 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 RAB44Q7Z6P3 723 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 CCDC103Q8IW40 242 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 RYBPQ8N488 228 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF333Q96JL9 665 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 TARS2Q9BW92 718 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 XYLT2Q9H1B5 865 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ADAM28Q9UKQ2 775 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 GRID1Q9ULK0 1009 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 TESPA1A2RU30 521 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SRP72O76094 671 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 GH1P01241 217 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 GCAP28676 217 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 RAB15P59190 212 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 YWHAHQ04917 246 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ITKQ08881 620 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 MGAT5Q09328 741 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 CLVS1Q8IUQ0 354 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 BSNDQ8WZ55 320 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ZFYVE19Q96K21 471 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 HSFY1Q96LI6 401 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 TAAR1Q96RJ0 339 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ZBED2Q9BTP6 218 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 RNPEPQ9H4A4 650 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 APOBEC3GQ9HC16 384 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 TEX264Q9Y6I9 313 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 LOXHD1Q8IVV2 1947 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ANKRD33BA6NCL7 494 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 HACD1B0YJ81 288 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 FCHO1O14526 889 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 RGS20O76081 388 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 CYP2C9P11712 490 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ALOX15P16050 662 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 CBX3Q13185 183 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF394Q53GI3 561 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 FAXCQ5TGI0 409 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 LBX2Q6XYB7 198 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 UTS2BQ765I0 119 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PLD3Q8IV08 490 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PIWIL2Q8TC59 973 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 IRGQQ8WZA9 623 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 OXNAD1Q96HP4 312 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF341Q9BYN7 854 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PDZD7Q9H5P4 517 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 THAP1Q9NVV9 213 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 BTBD19C9JJ37 291 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 CCNT2O60583 730 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 IL10P22301 178 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PROZP22891 400 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 AIF1P55008 147 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 BCAR1P56945 870 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ROR1Q01973 937 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 HNRNPDQ14103 355 aaKnown RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ARHGEF16Q5VV41 709 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SLC26A9Q7LBE3 791 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 NET1Q7Z628 596 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 HAPLN3Q96S86 360 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SLCO1B3Q9NPD5 702 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ARHGEF37A1IGU5 675 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SLCO1B7G3V0H7 640 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 HOXB8P17481 243 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 RGS2P41220 211 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 C21orf59P57076 290 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PTPN20Q4JDL3 420 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 LMBRD2Q68DH5 695 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 NIM1KQ8IY84 436 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 LRRC52Q8N7C0 313 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 TCP10LQ8TDR4 215 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PYDC1Q8WXC3 89 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 CPA5Q8WXQ8 436 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 USP13Q92995 863 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 ABHD8Q96I13 439 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SDCBP2Q9H190 292 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 GPRC5CQ9NQ84 441 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 HEY1Q9Y5J3 304 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SNX13Q9Y5W8 968 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 M0R3G1 203 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 TMEM63AO94886 807 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 CHN2P52757 468 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 USP46P62068 366 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 SLC1A5Q15758 541 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms