RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CYBBP04839 570 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 DRD1P21728 446 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 RRM1P23921 792 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 HNRNPH3P31942 346 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 MAGEA9P43362 315 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 RPS9P46781 194 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 ZNF75DP51815 510 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 KDSRQ06136 332 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 SLC25A52Q3SY17 297 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 DNAJC24Q6P3W2 148 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 DNAAF5Q86Y56 855 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 OR8K1Q8NGG5 319 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 JOSD2Q8TAC2 188 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 RNF34Q969K3 372 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 CFAP57Q96MR6 1250 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 TBCBQ99426 244 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 CALCOCO1Q9P1Z2 691 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 ARHGAP20Q9P2F6 1191 aa22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 XPO7Q9UIA9 1087 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-206ENST00000397408 KIAA1549LQ6ZVL6 1849 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 GOLGA6L7A0A1B0GV03 622 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22■■□□□ 1.11
TSPAN4-206ENST00000397408 CACNG3O60359 315 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 TSPAN3O60637 253 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 TULP3O75386 442 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 PENKP01210 267 aaPredicted RBP22■■□□□ 1.11
TSPAN4-206ENST00000397408 KRT3P12035 628 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 GZMAP12544 262 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 CCR1P32246 355 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 MESP2Q0VG99 397 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 FAM133BQ5BKY9 247 aaKnown RBP22■■□□□ 1.11
TSPAN4-206ENST00000397408 FYB2Q5VWT5 728 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 NADSYN1Q6IA69 706 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 Q6ZS52 159 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 DTWD2Q8NBA8 298 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 NT5C3BQ969T7 300 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 AZIN2Q96A70 460 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 XPO6Q96QU8 1125 aaKnown RBP22■■□□□ 1.11
TSPAN4-206ENST00000397408 PNKPQ96T60 521 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 CHRDQ9H2X0 955 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 ARHGEF4Q9NR80 690 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 PIGVQ9NUD9 493 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 ABHD10Q9NUJ1 306 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 DNAJC17Q9NVM6 304 aaKnown RBP22■■□□□ 1.11
TSPAN4-206ENST00000397408 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22■■□□□ 1.111e-6■■■□□ 18.3
TSPAN4-206ENST00000397408 ADAMTS1Q9UHI8 967 aa22■■□□□ 1.11
TSPAN4-206ENST00000397408 TCRBV5S1A1TA0A578 114 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 ATMINO43313 823 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 FTLP02792 175 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 SLC2A3P11169 496 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 SLC6A4P31645 630 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 ADKP55263 362 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 DEUP1Q05D60 604 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 TBX2Q13207 712 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 ARID5BQ14865 1188 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 RFWD3Q6PCD5 774 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 ATP6V0D2Q8N8Y2 350 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 DDI1Q8WTU0 396 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 RXFP2Q8WXD0 754 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 EZH1Q92800 747 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 MRFAP1L1Q96HT8 127 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 VCPIP1Q96JH7 1222 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 BTN2A3PQ96KV6 586 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 DDX50Q9BQ39 737 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 ZNHIT6Q9NWK9 470 aaKnown RBP21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 DEC1Q9P2X7 70 aa21.99■■□□□ 1.11
TSPAN4-206ENST00000397408 C2CD4BA6NLJ0 364 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 GFRA2O00451 464 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 RTN2O75298 545 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 KAT7O95251 611 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 PDGFRAP16234 1089 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 ABCB4P21439 1286 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 SDC4P31431 198 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 PPP2R5DQ14738 602 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 MPPE1Q53F39 396 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 GRAMD4Q6IC98 578 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 WDR59Q6PJI9 974 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 CNGA4Q8IV77 575 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 PHTF2Q8N3S3 785 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 PGAP3Q96FM1 320 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 MCEEQ96PE7 176 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 SLC12A6Q9UHW9 1150 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 HCN4Q9Y3Q4 1203 aa21.98■■□□□ 1.11
TSPAN4-206ENST00000397408 SIGLEC16A6NMB1 481 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 KCNU1A8MYU2 1149 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 AKR1B15C9JRZ8 316 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 TRIM24O15164 1050 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 F9P00740 461 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 APODP05090 189 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 RDXP35241 583 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 RFC1P35251 1148 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 SGSHP51688 502 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 NUBP1P53384 320 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 ATXN1P54253 815 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 ATP11AP98196 1134 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 TSR1Q2NL82 804 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 RAP1GAP2Q684P5 730 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 SND1Q7KZF4 910 aaKnown RBP eCLIP21.97■■□□□ 1.115e-7■■■□□ 16.2
TSPAN4-206ENST00000397408 CHSY1Q86X52 802 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 SFTPA1Q8IWL2 248 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms