RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 OR2I1PQ8NGU4 316 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 TOE1Q96GM8 510 aaKnown RBP9.21□□□□□ -0.94
CAPN3-208ENST00000397204 CDK15Q96Q40 435 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 CDK5RAP1Q96SZ6 601 aaKnown RBP9.21□□□□□ -0.94
CAPN3-208ENST00000397204 ARHGAP9Q9BRR9 750 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 NT5C1AQ9BXI3 368 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 C1QTNF2Q9BXJ5 285 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 BLZF1Q9H2G9 400 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 PRDM16Q9HAZ2 1276 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 CYP3A43Q9HB55 503 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 OSER1Q9NX31 292 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 WSB2Q9NYS7 404 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-208ENST00000397204 CLIC5Q9NZA1 410 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 KIAA1522Q9P206 1035 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-208ENST00000397204 APOBEC2Q9Y235 224 aaKnown RBP9.21□□□□□ -0.94
CAPN3-208ENST00000397204 STON1Q9Y6Q2 735 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 KIAA1549LQ6ZVL6 1849 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 LOC400499M0QZD8 3231 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 A0A1W2PQH9 124 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 TIMM44O43615 452 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 STC2O76061 302 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 PENKP01210 267 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-208ENST00000397204 FTH1P19P0C7X4 201 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 ZNF883P0CG24 379 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 RALAP11233 206 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 MAOBP27338 520 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 ADORA2BP29275 332 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 CASP1P29466 404 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 KIF11P52732 1056 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 DLG4P78352 724 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 INCA1Q0VD86 236 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 STK4Q13043 487 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 CUL4BQ13620 913 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 FUT11Q495W5 492 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 KIAA1324Q6UXG2 1013 aaKnown RBP9.2□□□□□ -0.94
CAPN3-208ENST00000397204 CCNI2Q6ZMN8 369 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-208ENST00000397204 DBX2Q6ZNG2 339 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 CLEC20AQ6ZU45 233 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 CCDC186Q7Z3E2 898 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 NAXDQ8IW45 347 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 UCMAQ8WVF2 138 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 CAMK1GQ96NX5 476 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 NUP58Q9BVL2 599 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 BACH2Q9BYV9 841 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 SLC2A11Q9BYW1 496 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 UBXN6Q9BZV1 441 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 NMUR1Q9HB89 426 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 FAM49BQ9NUQ9 324 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 PLK2Q9NYY3 685 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 USP36Q9P275 1121 aaKnown RBP9.2□□□□□ -0.94
CAPN3-208ENST00000397204 THAP10Q9P2Z0 257 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-208ENST00000397204 NAGPAQ9UK23 515 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 RAD54BQ9Y620 910 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 USP3Q9Y6I4 520 aa9.2□□□□□ -0.94
CAPN3-208ENST00000397204 HELZP42694 1942 aaKnown RBP9.2□□□□□ -0.94
CAPN3-208ENST00000397204 FLNBO75369 2602 aaKnown RBP9.2□□□□□ -0.94
CAPN3-208ENST00000397204 URB1O60287 2271 aaKnown RBP9.2□□□□□ -0.94
CAPN3-208ENST00000397204 METTL12A8MUP2 240 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 MAPK13O15264 365 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 CYP26A1O43174 497 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 SYNCRIPO60506 623 aaKnown RBP9.19□□□□□ -0.94
CAPN3-208ENST00000397204 CBFA2T3O75081 653 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 IGLV3-19P01714 112 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 HLA-DRAP01903 254 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 KLKB1P03952 638 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 SLFN14P0C7P3 912 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 NCAM1P13591 858 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 AFMP43652 599 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 ASPAP45381 313 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 ME1P48163 572 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 TPMTP51580 245 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 SCAPQ12770 1279 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 GRIK2Q13002 908 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 ORC1Q13415 861 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 FYB2Q5VWT5 728 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 RESP18Q5W5W9 173 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 ATL3Q6DD88 541 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 IL27RAQ6UWB1 636 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 GPRIN1Q7Z2K8 1008 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 SCD5Q86SK9 330 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 TMPRSS6Q8IU80 811 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 CEP57L1Q8IYX8 460 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 ARHGAP18Q8N392 663 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 BHMTQ93088 406 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 ELMO3Q96BJ8 720 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 SIPA1Q96FS4 1042 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 PIWIL1Q96J94 861 aaKnown RBP9.19□□□□□ -0.94
CAPN3-208ENST00000397204 CDC6Q99741 560 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 GPR174Q9BXC1 333 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 DUSP16Q9BY84 665 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 IMPG2Q9BZV3 1241 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 MKRN2Q9H000 416 aaKnown RBP9.19□□□□□ -0.94
CAPN3-208ENST00000397204 PCED1AQ9H1Q7 454 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 SLC6A17Q9H1V8 727 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 KCTD10Q9H3F6 313 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 CCDC86Q9H6F5 360 aaKnown RBP9.19□□□□□ -0.94
CAPN3-208ENST00000397204 ATP13A2Q9NQ11 1180 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 ELOVL2Q9NXB9 296 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 GMPR2Q9P2T1 348 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms