RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 ZNF677Q86XU0 584 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 COLGALT2Q8IYK4 626 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 FAM71AQ8IYT1 594 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 POU5F2Q8N7G0 328 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 EPS8L1Q8TE68 723 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 CCDC124Q96CT7 223 aaKnown RBP10.19□□□□□ -0.78
APTX-207ENST00000397172 SRPK1Q96SB4 655 aaKnown RBP10.19□□□□□ -0.78
APTX-207ENST00000397172 CTRCQ99895 268 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 PSD2Q9BQI7 771 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 EFHD1Q9BUP0 239 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 PARVGQ9HBI0 331 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 SLC38A7Q9NVC3 462 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 HOXC10Q9NYD6 342 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 KCND2Q9NZV8 630 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 SIRPGQ9P1W8 387 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 KLHL3Q9UH77 587 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 DOLKQ9UPQ8 538 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 PLLPQ9Y342 182 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 IFT52Q9Y366 437 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 PCDHB2Q9Y5E7 798 aa10.19□□□□□ -0.78
APTX-207ENST00000397172 GOLGA8QA0A0J9YX86 632 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 GOLGA8OA6NCC3 632 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 GOLGA8NF8WBI6 632 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 PSMD12O00232 456 aaPredicted RBP10.18□□□□□ -0.78
APTX-207ENST00000397172 SLC22A2O15244 555 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 XPOTO43592 962 aaKnown RBP10.18□□□□□ -0.78
APTX-207ENST00000397172 FBXO21O94952 628 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 STAMBPO95630 424 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 APOEP02649 317 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 CAPNS1P04632 268 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 MXI1P50539 228 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 CASP5P51878 434 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 YWHAGP61981 247 aaKnown RBP eCLIP10.18□□□□□ -0.78
APTX-207ENST00000397172 SNRPFP62306 86 aaKnown RBP10.18□□□□□ -0.78
APTX-207ENST00000397172 CAMK2BQ13554 666 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 ATP1A4Q13733 1029 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 TFDP1Q14186 410 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 FLOT2Q14254 428 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 COG2Q14746 738 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 TAF1CQ15572 869 aaPredicted RBP10.18□□□□□ -0.78
APTX-207ENST00000397172 CHI3L2Q15782 390 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 GPATCH4Q5T3I0 446 aaKnown RBP10.18□□□□□ -0.78
APTX-207ENST00000397172 SPOPLQ6IQ16 392 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 DCLRE1AQ6PJP8 1040 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 CAPN12Q6ZSI9 719 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 USP37Q86T82 979 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 C11orf74Q86VG3 221 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 SLC26A11Q86WA9 606 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 TTC30AQ86WT1 665 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 PALB2Q86YC2 1186 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 SIX6OS1Q8N1H7 587 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 TTC39CQ8N584 583 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 PCYOX1LQ8NBM8 494 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 RIN3Q8TB24 985 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 PIWIL2Q8TC59 973 aaKnown RBP10.18□□□□□ -0.78
APTX-207ENST00000397172 SLC44A1Q8WWI5 657 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 HAS1Q92839 578 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 RANBP9Q96S59 729 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 TUBA1CQ9BQE3 449 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 RIOX1Q9H6W3 641 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 ALG13Q9NP73 1137 aaKnown RBP10.18□□□□□ -0.78
APTX-207ENST00000397172 C8orf4Q9NR00 106 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 MRGBPQ9NV56 204 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 TMEM260Q9NX78 707 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 FEM1BQ9UK73 627 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 PCNTO95613 3336 aa10.18□□□□□ -0.78
APTX-207ENST00000397172 MYH11P35749 1972 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.17□□□□□ -0.78
APTX-207ENST00000397172 GOLGA8CPA6NN73 597 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 TBKBP1A7MCY6 615 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 E7ESA3 106 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 GOLGA8RI6L899 631 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 SNNO75324 88 aaPredicted RBP10.17□□□□□ -0.78
APTX-207ENST00000397172 KRT6AP02538 564 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 FUCA1P04066 466 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 KRT6BP04259 564 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 FDX1P10109 184 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 GLRA2P23416 452 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 GRK2P25098 689 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 RXRGP48443 463 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 TUBA1BP68363 451 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 KRT76Q01546 638 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 OCA2Q04671 838 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 ZNF846Q147U1 533 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 PSMD6Q15008 389 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 PHKG1Q16816 387 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 CBWD6Q4V339 395 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 CBWD3Q5JTY5 395 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 CBWD5Q5RIA9 395 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 ZNF362Q5T0B9 420 aaPredicted RBP10.17□□□□□ -0.78
APTX-207ENST00000397172 ITPRIPL1Q6GPH6 555 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 ELMSAN1Q6PJG2 1045 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 RNF111Q6ZNA4 994 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 LINC00299Q6ZSB3 139 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 TUBA1AQ71U36 451 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 FAM160B2Q86V87 743 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 TICAM1Q8IUC6 712 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 CHERPQ8IWX8 916 aaKnown RBP10.17□□□□□ -0.78
APTX-207ENST00000397172 HIPK4Q8NE63 616 aa10.17□□□□□ -0.78
APTX-207ENST00000397172 FBXO27Q8NI29 283 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms