RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ZSWIM1Q9BR11 485 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 SDCBP2Q9H190 292 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 LHX5Q9H2C1 402 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 HPS4Q9NQG7 708 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 GKN1Q9NS71 199 aa18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 DDX43Q9NXZ2 648 aaKnown RBP18.24■□□□□ 0.51
TNFSF13-205ENST00000396545 HUS1O60921 280 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 CSH1P0DML2 217 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 CSH2P0DML3 217 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 MYBL2P10244 700 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 CDH5P33151 784 aaPredicted RBP18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 NSFP46459 744 aaKnown RBP18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 CDH8P55286 799 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 RNASE9P60153 205 aaKnown RBP18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 PTP4A2Q12974 167 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 SRSF5Q13243 272 aaKnown RBP18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 TXNDC8Q6A555 127 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 HEATR6Q6AI08 1181 aaKnown RBP18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 UBL4BQ8N7F7 174 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 TMEM35BQ8NCS4 154 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 RIN3Q8TB24 985 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 CPA5Q8WXQ8 436 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 KRT12Q99456 494 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 KIF9Q9HAQ2 790 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 GDF3Q9NR23 364 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 TDP1Q9NUW8 608 aa18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 CHORDC1Q9UHD1 332 aaPredicted RBP18.23■□□□□ 0.51
TNFSF13-205ENST00000396545 ACACBO00763 2458 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 OTOL1A6NHN0 477 aaPredicted RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 BHMG1C9JSJ3 638 aaPredicted RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 RRM1P23921 792 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 ACAT1P24752 427 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 CTNNA1P35221 906 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 PEX5P50542 639 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 CBX1P83916 185 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 SLC7A5Q01650 507 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 RUNX3Q13761 415 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 TMEM196Q5HYL7 178 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 SDHAF4Q5VUM1 108 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 MON1AQ86VX9 555 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 SLC4A11Q8NBS3 891 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 WHAMMQ8TF30 809 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 AENQ8WTP8 325 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 MRPS31Q92665 395 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 TRMT2BQ96GJ1 504 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 MYRFLQ96LU7 910 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 EBF3Q9H4W6 596 aa18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 MAGED2Q9UNF1 606 aaPredicted RBP18.22■□□□□ 0.51
TNFSF13-205ENST00000396545 CCDC66A2RUB6 948 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 GABRDO14764 452 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 CYP2F1P24903 491 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 HOXC13P31276 330 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 RAP1GAPP47736 663 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 NDST1P52848 882 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 RPL10AP62906 217 aaKnown RBP18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 ZNF268Q14587 947 aaPredicted RBP18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 CASP8Q14790 479 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 CNGA2Q16280 664 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 DDR2Q16832 855 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 CCDC142Q17RM4 750 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 ZNF394Q53GI3 561 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 SGO2Q562F6 1265 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 TRIM68Q6AZZ1 485 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 OSTM1Q86WC4 334 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 ADGRF2Q8IZF7 708 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 KRT35Q92764 455 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 NAP1L3Q99457 506 aaPredicted RBP18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 RTKNQ9BST9 563 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 TMEM110-MUSTN1A8MSY1 372 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 KRIT1O00522 736 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 TRDMT1O14717 391 aaKnown RBP18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 CD19P15391 556 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 WARSP23381 471 aaKnown RBP18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 SOWAHAQ2M3V2 549 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 PLEKHA7Q6IQ23 1121 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 FSTL4Q6MZW2 842 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 PKN3Q6P5Z2 889 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 WDR5BQ86VZ2 330 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 BTBD6Q96KE9 485 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 ELOVL4Q9GZR5 314 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 VIPAS39Q9H9C1 493 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 SEMA4GQ9NTN9 838 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 UXTQ9UBK9 157 aaPredicted RBP18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 PCDHA3Q9Y5H8 950 aa18.21■□□□□ 0.51
TNFSF13-205ENST00000396545 ZNF638Q14966 1978 aaKnown RBP18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 RAD51CO43502 376 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 HCRTO43612 131 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 HEXIM1O94992 359 aaKnown RBP18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 FGGP02679 453 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 GLI1P08151 1106 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 ARSAP15289 507 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 MMP8P22894 467 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 BRD2P25440 801 aaKnown RBP18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 PCSK1P29120 753 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 LHX1P48742 406 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 GRSF1Q12849 480 aaKnown RBP eCLIP18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 PASD1Q8IV76 773 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 IFT20Q8IY31 132 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms