RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 FBXW11Q9UKB1 542 aa20.03■□□□□ 0.8
LMNB1-202ENST00000395354 KRT14P02533 472 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 EPCAMP16422 314 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 HSD17B3P37058 310 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 GRIK1P39086 918 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 CACNA2D1P54289 1103 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 DHX9Q08211 1270 aaKnown RBP20.02■□□□□ 0.8
LMNB1-202ENST00000395354 SLMAPQ14BN4 828 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 DPYSL2Q16555 572 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 TCEAL5Q5H9L2 206 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 SCN4BQ8IWT1 228 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 GOLGA6L1Q8N7Z2 621 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 FAF2Q96CS3 445 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 ZIM3Q96PE6 472 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 KCNK16Q96T55 309 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 ULBP1Q9BZM6 244 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 HCFC2Q9Y5Z7 792 aa20.02■□□□□ 0.8
LMNB1-202ENST00000395354 ZBED1O96006 694 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 ADCY8P40145 1251 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 SULT1E1P49888 294 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 OTUD4Q01804 1114 aaKnown RBP20.01■□□□□ 0.79
LMNB1-202ENST00000395354 DDR2Q16832 855 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 PM20D1Q6GTS8 502 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 RHBDF2Q6PJF5 856 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 CCDC149Q6ZUS6 474 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 DEFB123Q8N688 67 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 ACTL9Q8TC94 416 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 FAM118BQ9BPY3 351 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 TRIM62Q9BVG3 475 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 FOXP3Q9BZS1 431 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 TMEM30AQ9NV96 361 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 PLXNA3P51805 1871 aa20.01■□□□□ 0.79
LMNB1-202ENST00000395354 PTPRDP23468 1912 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 GOLGA8KD6RF30 607 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 SOAT2O75908 522 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 TFE3P19532 575 aaPredicted RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 TGM2P21980 687 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 AIF1P55008 147 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 RPL10AP62906 217 aaKnown RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 HYAL1Q12794 435 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 DCAF6Q58WW2 860 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 BEND5Q7L4P6 421 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 TRAF3IP1Q8TDR0 691 aaPredicted RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 CDX2Q99626 313 aaPredicted RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 PCDH9Q9HC56 1237 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 RCOR3Q9P2K3 495 aaPredicted RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 DPP7Q9UHL4 492 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 MTCL1Q9Y4B5 1905 aaKnown RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 TRIM66O15016 1216 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 ZFXP17010 805 aaPredicted RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 IL4RP24394 825 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 L1CAMP32004 1257 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 RDXP35241 583 aaKnown RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 ALDH1A3P47895 512 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 DYNLT1P63172 113 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 UAP1Q16222 522 aaPredicted RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 ANKRD20A8PQ5CZ79 823 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 ZC3H12AQ5D1E8 599 aaKnown RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 SLC9A4Q6AI14 798 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 CEP128Q6ZU80 1094 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 SLC7A14Q8TBB6 771 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 PGAP3Q96FM1 320 aaPredicted RBP20■□□□□ 0.79
LMNB1-202ENST00000395354 C8orf48Q96LL4 319 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 ADAM33Q9BZ11 813 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 MAN1C1Q9NR34 630 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 ANAPC5Q9UJX4 755 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 AP4E1Q9UPM8 1137 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 INSL5Q9Y5Q6 135 aa20■□□□□ 0.79
LMNB1-202ENST00000395354 APOL1O14791 398 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 MCF2LO15068 1137 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 TP73O15350 636 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 LTFP02788 710 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 C8AP07357 584 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 RARGP13631 454 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 GPR15P49685 360 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 PMS2P54278 862 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 FAM193AP78312 1265 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 GABPB1Q06547 395 aaPredicted RBP19.99■□□□□ 0.79
LMNB1-202ENST00000395354 MMRN1Q13201 1228 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 KCNC3Q14003 757 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 NOMO1Q15155 1222 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 SDHAF4Q5VUM1 108 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 GPRIN1Q7Z2K8 1008 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 EFHBQ8N7U6 833 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 MYLIPQ8WY64 445 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 NDRG1Q92597 394 aaKnown RBP19.99■□□□□ 0.79
LMNB1-202ENST00000395354 P3H4Q92791 437 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 HAUS1Q96CS2 278 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 FZD10Q9ULW2 581 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 PLAAQ9Y263 795 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 YIPF1Q9Y548 306 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 USP3Q9Y6I4 520 aa19.99■□□□□ 0.79
LMNB1-202ENST00000395354 YJEFN3A6XGL0 299 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 E7ENQ6 273 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 CAPN9O14815 690 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 FYNP06241 537 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 ITGA8P53708 1063 aa19.98■□□□□ 0.79
LMNB1-202ENST00000395354 EIF3BP55884 814 aaKnown RBP19.98■□□□□ 0.79
LMNB1-202ENST00000395354 EIF3EP60228 445 aaKnown RBP19.98■□□□□ 0.79
LMNB1-202ENST00000395354 TRIP13Q15645 432 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms