RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MYBPC3Q14896 1274 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 ANKRD20A4Q4UJ75 823 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 KLHDC10Q6PID8 442 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 TRIM74Q86UV6 250 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 TRIM73Q86UV7 250 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 PQLC3Q8N755 202 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 RSAD1Q9HA92 442 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 SLC38A10Q9HBR0 1119 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 TDRKHQ9Y2W6 561 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 FIS1Q9Y3D6 152 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 KLF11O14901 512 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 USP12O75317 370 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 SNNO75324 88 aaPredicted RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 ASLP04424 464 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 PABPC4LP0CB38 370 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 FGF3P11487 239 aaPredicted RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 EIF4BP23588 611 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 MLH1P40692 756 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 TUBB3Q13509 450 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 PDE1CQ14123 709 aaPredicted RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 DLG2Q15700 870 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 SLC9B1Q4ZJI4 515 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 NIPA1Q7RTP0 329 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 AMIGO2Q86SJ2 522 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 RNF149Q8NC42 400 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 LENG8Q96PV6 779 aaPredicted RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 MRPL1Q9BYD6 325 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 SDCBP2Q9H190 292 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 DHX35Q9H5Z1 703 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 CAB39LQ9H9S4 337 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 DNAAF2Q9NVR5 837 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 EMCNQ9ULC0 261 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 MICAL2O94851 1124 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 LSM8O95777 96 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 ALDOAP04075 364 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 SRGAP2BP0DMP2 458 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 CXCL8P10145 99 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 FDFT1P37268 417 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 ASPAP45381 313 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 NBPF12Q5TAG4 269 aaPredicted RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 FAM219BQ5XKK7 198 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 VSIG10LQ86VR7 867 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 ZNF781Q8N8C0 355 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 SNX31Q8N9S9 440 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 TRAPPC12Q8WVT3 735 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 C17orf75Q9HAS0 396 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 GPAMQ9HCL2 828 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 PAK5Q9P286 719 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 PPME1Q9Y570 386 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 TFAP2AP05549 437 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 AOC1P19801 751 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 RPL10P27635 214 aaKnown RBP14.74□□□□□ -0.05
CLIP2-203ENST00000395060 TYK2P29597 1187 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 WASHC5Q12768 1159 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 TMEM198Q66K66 360 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 MBLAC2Q68D91 279 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 SLFN12LQ6IEE8 588 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 UGT2A3Q6UWM9 527 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 ZFP28Q8NHY6 868 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 MAPK15Q8TD08 544 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 LENG1Q96BZ8 264 aaPredicted RBP14.74□□□□□ -0.05
CLIP2-203ENST00000395060 LRGUKQ96M69 825 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 AGAP3Q96P47 875 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 OR52B2Q96RD2 323 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 CDRT15Q96T59 188 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 LPIN3Q9BQK8 851 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 B3GNT5Q9BYG0 378 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 ZNF302Q9NR11 478 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 PDLIM7Q9NR12 457 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 H3BSA7 217 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 INO80B-WBP1J3KQ70 363 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 VILLO15195 856 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 CSPG5O95196 566 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 XKR3Q5GH77 459 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 SESTD1Q86VW0 696 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 SCUBE3Q8IX30 993 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 CMASQ8NFW8 434 aaPredicted RBP14.74□□□□□ -0.05
CLIP2-203ENST00000395060 GSDMBQ8TAX9 411 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 GRIN3AQ8TCU5 1115 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 RNF157Q96PX1 679 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 HAPLN3Q96S86 360 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 INO80BQ9C086 356 aaPredicted RBP14.74□□□□□ -0.05
CLIP2-203ENST00000395060 ANLNQ9NQW6 1124 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 HSFX1Q9UBD0 423 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 HES2Q9Y543 173 aa14.74□□□□□ -0.05
CLIP2-203ENST00000395060 NDC80O14777 642 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 APOL1O14791 398 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 CHADO15335 359 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 FOXD2O60548 495 aaPredicted RBP14.73□□□□□ -0.05
CLIP2-203ENST00000395060 HSPA4LO95757 839 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 LDHAP00338 332 aaKnown RBP14.73□□□□□ -0.05
CLIP2-203ENST00000395060 EPHA3P29320 983 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 PTPN7P35236 360 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 MYLK3Q32MK0 819 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 IL31Q6EBC2 164 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 KYAT3Q6YP21 454 aaKnown RBP14.73□□□□□ -0.05
CLIP2-203ENST00000395060 NIPA2Q8N8Q9 360 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 PCDH19Q8TAB3 1148 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 COG4Q9H9E3 785 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms