RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 USP38Q8NB14 1042 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 TAAR1Q96RJ0 339 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 ANGPT4Q9Y264 503 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 SMIM22K7EJ46 135 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 SRGNP10124 158 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 TSPAN8P19075 237 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 MAPK1P28482 360 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 TAF6P49848 677 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 HIRAP54198 1017 aaPredicted RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 PARGQ86W56 976 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 ADGRF2Q8IZF7 708 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 TRIM9Q9C026 710 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 WDR35Q9P2L0 1181 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 USP20Q9Y2K6 914 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 NTRK1P04629 796 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 PPP2R1BP30154 601 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 EXOSC10Q01780 885 aaKnown RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 SGCGQ13326 291 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF544Q6NX49 715 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 SCAIQ8N9R8 606 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 COLGALT1Q8NBJ5 622 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 STK36Q9NRP7 1315 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 CCL15-CCL14A0A0B4J2E2 113 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 A0A1W2PRG6 482 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 ADCY6O43306 1168 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 IL18RAPO95256 599 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 PTPN1P18031 435 aaKnown RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 NPY2RP49146 381 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 CLCN3P51790 818 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 CCL15Q16663 113 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 FNDC3BQ53EP0 1204 aaKnown RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 SLC47A2Q86VL8 602 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 CHPFQ8IZ52 775 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 TUT1Q9H6E5 874 aaKnown RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 TMEM8AQ9HCN3 771 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 PLA2G4CQ9UP65 541 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 ZMPSTE24O75844 475 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 RAD23AP54725 363 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 SEPT1Q8WYJ6 367 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 TMEM169Q96HH4 297 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 PAFAH2Q99487 392 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 MYOCQ99972 504 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 MIR1-1HGQ9H1L0 117 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 PDGFCQ9NRA1 345 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 KPNA5O15131 536 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 DGAT1O75907 488 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 FAM98BQ52LJ0 330 aaKnown RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 GPAT3Q53EU6 434 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 ACAD10Q6JQN1 1059 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 ARMCX6Q7L4S7 300 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 POMKQ9H5K3 350 aa12.53□□□□□ -0.4
SIN3A-202ENST00000394947 TLR8Q9NR97 1041 aaKnown RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 RBMX2Q9Y388 322 aaKnown RBP12.53□□□□□ -0.4
SIN3A-202ENST00000394947 F8VZ95 297 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 C21orf59P57076 290 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 MTAPQ13126 283 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF605Q86T29 641 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 DAW1Q8N136 415 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.4
SIN3A-202ENST00000394947 MTIF3Q9H2K0 278 aaKnown RBP12.52□□□□□ -0.4
SIN3A-202ENST00000394947 ABCB10Q9NRK6 738 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 GGA3Q9NZ52 723 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 PDIA6Q15084 440 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 USP49Q70CQ1 688 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 BPIFB6Q8NFQ5 453 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 CMTM6Q9NX76 183 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 TAGLN3Q9UI15 199 aa12.52□□□□□ -0.4
SIN3A-202ENST00000394947 COL15A1P39059 1388 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 KCNQ2O43526 872 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 FASTKQ14296 549 aaKnown RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 GPC6Q9Y625 555 aaPredicted RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 ABCC10Q5T3U5 1492 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 CES2O00748 559 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 IGFBP4P22692 258 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 IL2P60568 153 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 CCZ1BP86790 482 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 CCZ1P86791 482 aaPredicted RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 KRR1Q13601 381 aaKnown RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 SPOCD1Q6ZMY3 1216 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 PEG10Q86TG7 708 aaKnown RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 MTA3Q9BTC8 594 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 MARCH7Q9H992 704 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 BATF3Q9NR55 127 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 PDP2Q9P2J9 529 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 TSPOAP1O95153 1857 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 ERVV-1B6SEH8 477 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 FBXO16Q8IX29 292 aaPredicted RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 MAGEB18Q96M61 343 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 TRNT1Q96Q11 434 aaKnown RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 RUSC1Q9BVN2 902 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 ATG10Q9H0Y0 220 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 A1CFQ9NQ94 594 aaKnown RBP12.52□□□□□ -0.41
SIN3A-202ENST00000394947 ZNF112Q9UJU3 913 aa12.52□□□□□ -0.41
SIN3A-202ENST00000394947 SDR42E2A6NKP2 422 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms