RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PDE5AO76074 875 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 PROCP04070 461 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 MYL4P12829 197 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 OCRLQ01968 901 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 GAD2Q05329 585 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 CCDC153Q494R4 210 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 MSS51Q4VC12 460 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 RINLQ6ZS11 566 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 SERBP1Q8NC51 408 aaKnown RBP eCLIP12□□□□□ -0.49
UBE2D3-209ENST00000394804 RBM15BQ8NDT2 890 aaKnown RBP12□□□□□ -0.49
UBE2D3-209ENST00000394804 SLC7A14Q8TBB6 771 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 C2CD2Q9Y426 696 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 A0A0A0MRY4 1105 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 TPP1O14773 563 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 CILPO75339 1184 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 SMNDC1O75940 238 aaKnown RBP eCLIP12□□□□□ -0.493e-7■■□□□ 11.4
UBE2D3-209ENST00000394804 SNUPNO95149 360 aaKnown RBP12□□□□□ -0.49
UBE2D3-209ENST00000394804 TMEM62Q0P6H9 643 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 Q3C1V9 767 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 RIOX2Q8IUF8 465 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 SPATA13Q96N96 652 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 CEP41Q9BYV8 373 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 ELOVL4Q9GZR5 314 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 CCDC68Q9H2F9 335 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 XPNPEP3Q9NQH7 507 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 DPPA5A6NC42 116 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 PRR5-ARHGAP8B1AHC4 643 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 PSMD3O43242 534 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 MAGEC1O60732 1142 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 DGKIO75912 1065 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 SERPINB5P36952 375 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 ARHGAP8P85298 464 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 SLC25A3Q00325 362 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 CDC42EP1Q00587 391 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 MPP3Q13368 585 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 NAPEPLDQ6IQ20 393 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 FASTKD5Q7L8L6 764 aaKnown RBP12□□□□□ -0.49
UBE2D3-209ENST00000394804 TTC7BQ86TV6 843 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 CMASQ8NFW8 434 aaPredicted RBP12□□□□□ -0.49
UBE2D3-209ENST00000394804 DTNBP1Q96EV8 351 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 SDCBP2Q9H190 292 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 STN1Q9H668 368 aaKnown RBP12□□□□□ -0.49
UBE2D3-209ENST00000394804 NDUFA13Q9P0J0 144 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 HBS1LQ9Y450 684 aaKnown RBP12□□□□□ -0.49
UBE2D3-209ENST00000394804 F8W8V4 182 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 GJB1P08034 283 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 PNPLA4P41247 253 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 TAF6P49848 677 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 UBAP2LQ14157 1087 aaKnown RBP12□□□□□ -0.49
UBE2D3-209ENST00000394804 SV2CQ496J9 727 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 ACSBG2Q5FVE4 666 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 TEDDM1Q5T9Z0 273 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 NOTUMQ6P988 496 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 TSHZ1Q6ZSZ6 1077 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 TRIM67Q6ZTA4 783 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 DCLK2Q8N568 766 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 C1orf127Q8N9H9 656 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 PYDC1Q8WXC3 89 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 WNK4Q96J92 1243 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 TCF7L2Q9NQB0 619 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 CNTNAP2Q9UHC6 1331 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 DCXO43602 365 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 CRHR1P34998 444 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 ASPAP45381 313 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 CDK7P50613 346 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 LBRQ14739 615 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 GRTP1Q5TC63 336 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 SEL1L3Q68CR1 1132 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 BNC2Q6ZN30 1099 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 LRRN4Q8WUT4 740 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 TRAPPC9Q96Q05 1148 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 HAUS8Q9BT25 410 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 MRPL1Q9BYD6 325 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 TM7SF2O76062 418 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 GABRB2P47870 512 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 CRADDP78560 199 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 SLC25A11Q02978 314 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 PRKD1Q15139 912 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 TCHHL1Q5QJ38 904 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 CELF3Q5SZQ8 465 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 PLPPR4Q7Z2D5 763 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 GDPD5Q8WTR4 605 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 PTPRN2Q92932 1015 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 CPNE1Q99829 537 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 SIK2Q9H0K1 926 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 TJP2Q9UDY2 1190 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 VANGL2Q9ULK5 521 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 KAT6AQ92794 2004 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 BCLAF3A2AJT9 711 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 MSCO60682 206 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 TRIM13O60858 407 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 C6orf222P0C671 652 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 ATXN3P54252 364 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 KIF19Q2TAC6 998 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 SPANXN3Q5MJ09 141 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 RNF135Q8IUD6 432 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 TDRD5Q8NAT2 981 aaKnown RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 PPHLN1Q8NEY8 458 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms