RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 IRAK2O43187 625 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 MOCS2O96007 188 aaPredicted RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 SRGAP2BP0DMP2 458 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 RARGP13631 454 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 SYN1P17600 705 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 STIP1P31948 543 aaKnown RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 CCR1P32246 355 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 ACTN2P35609 894 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 PPM1AP35813 382 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 NR2C2P49116 596 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 PMS2P54278 862 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 EFEMP1Q12805 493 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 TAF12Q16514 161 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 NCBP2-AS2Q69YL0 99 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 UBE2Q1Q7Z7E8 422 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 CDKL3Q8IVW4 592 aaPredicted RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 GOLGA6L1Q8N7Z2 621 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 SERPINB11Q96P15 392 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 ZIM3Q96PE6 472 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 EPAS1Q99814 870 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 CYP4F11Q9HBI6 524 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 TLR8Q9NR97 1041 aaKnown RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 MRPL17Q9NRX2 175 aaKnown RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 DNAJC17Q9NVM6 304 aaKnown RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 IL37Q9NZH6 218 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 CXXC1Q9P0U4 656 aaPredicted RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 OR12D3Q9UGF7 316 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 AFF4Q9UHB7 1163 aaKnown RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 TPX2Q9ULW0 747 aaKnown RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 PLXNA3P51805 1871 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 MKI67P46013 3256 aaKnown RBP8.94□□□□□ -0.98
TDP1-203ENST00000393454 I6L893 689 aaPredicted RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 RRP9O43818 475 aaKnown RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 PPFIA2O75334 1257 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 GJB5O95377 273 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 SEC24AO95486 1093 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 IGLV3-25P01717 112 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 ATF6P18850 670 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 RBL1P28749 1068 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 OAS2P29728 719 aaKnown RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 RPL22P35268 128 aaKnown RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 PSEN1P49768 467 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 SLC10A2Q12908 348 aaPredicted RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 SLMAPQ14BN4 828 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 BRMS1LQ5PSV4 323 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 C10orf120Q5SQS8 335 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 FAM182AQ5T1J6 154 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 RASIP1Q5U651 963 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 RWDD4Q6NW29 188 aaKnown RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 BZW1Q7L1Q6 419 aaKnown RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 NETO2Q8NC67 525 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 ZNF461Q8TAF7 563 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 PRDM16Q9HAZ2 1276 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 COMMD8Q9NX08 183 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 PLAAQ9Y263 795 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 GREB1Q4ZG55 1949 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 ALPK3Q96L96 1907 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 KIAA1671Q9BY89 1806 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 BCLAF3A2AJT9 711 aaKnown RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 CFAP69A5D8W1 941 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 H3BQF6 201 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 PRRG1O14668 218 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 NDC80O14777 642 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 MFSD11O43934 449 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 OPA1O60313 960 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 PAGE1O75459 146 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 FGF18O76093 207 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 TBX18O95935 607 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 ERCC2P18074 760 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 ELF1P32519 619 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 CHKAP35790 457 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 ALDH1A3P47895 512 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 NRLP54845 237 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 TBX4P57082 545 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 BASP1P80723 227 aaKnown RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 XRCC4Q13426 336 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 DPYSQ14117 519 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 UAP1Q16222 522 aaPredicted RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 TMEM240Q5SV17 173 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 TPGS2Q68CL5 300 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 PSRC1Q6PGN9 363 aaPredicted RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 PDZD4Q76G19 769 aaPredicted RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 PCGF5Q86SE9 256 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 MIB1Q86YT6 1006 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 TFB1MQ8WVM0 346 aaKnown RBP8.93□□□□□ -0.98
TDP1-203ENST00000393454 PWWP2AQ96N64 755 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 PRDM10Q9NQV6 1147 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.93□□□□□ -0.98
TDP1-203ENST00000393454 ARHGEF38Q9NXL2 777 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 DTLQ9NZJ0 730 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 INSL6Q9Y581 213 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 SLC4A7Q9Y6M7 1214 aa8.93□□□□□ -0.98
TDP1-203ENST00000393454 FAM92AA1XBS5 289 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 AGPSO00116 658 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 POLR3GO15318 223 aaPredicted RBP8.92□□□□□ -0.98
TDP1-203ENST00000393454 TP73O15350 636 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 LRIG2O94898 1065 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 ABLIM3O94929 683 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 CSPG5O95196 566 aa8.92□□□□□ -0.98
TDP1-203ENST00000393454 HMBSP08397 361 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms