RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 PBLDP30039 288 aaPredicted RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 CCND2P30279 289 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 NKX2-5P52952 324 aaPredicted RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 CACNB3P54284 484 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 RPL10AP62906 217 aaKnown RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 SKP1P63208 163 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 XIAPP98170 497 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 SLC29A2Q14542 456 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 ZNF234Q14588 700 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 GSTA3Q16772 222 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 UGP2Q16851 508 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 C6orf52Q5T4I8 152 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 TTI2Q6NXR4 508 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 FBXO33Q7Z6M2 555 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 SETD3Q86TU7 594 aaPredicted RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 ANKLE2Q86XL3 938 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 TTC13Q8NBP0 860 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 OR6B3Q8NGW1 331 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 NXNL1Q96CM4 212 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 HSPBAP1Q96EW2 488 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 AIFM3Q96NN9 605 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 BTBD10Q9BSF8 475 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 SIK2Q9H0K1 926 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 FXYD6Q9H0Q3 95 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 ABCG8Q9H221 673 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 TPK1Q9H3S4 243 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 ELAC1Q9H777 363 aaKnown RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 TMEM206Q9H813 350 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 GPN1Q9HCN4 374 aaPredicted RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 LIMD1Q9UGP4 676 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 GNPTGQ9UJJ9 305 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 PADI4Q9UM07 663 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 SMG5Q9UPR3 1016 aaKnown RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 ARL5AQ9Y689 179 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 MAP3K5Q99683 1374 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 ISPDA4D126 451 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 H0YIN7 160 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 BOLA2-SMG1P6H3BVE0 249 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 MED7O43513 233 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 LARGE1O95461 756 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 WDPCPO95876 746 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 CHRNGP07510 517 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 FAM153BP0C7A2 387 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 VDRP11473 427 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 FASP25445 335 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 PSMA3P25788 255 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 G0S2P27469 103 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 TGFBR2P37173 567 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 ABCG1P45844 678 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 ACADVLP49748 655 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 KLK7P49862 253 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 SLC5A3P53794 718 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 RNF4P78317 190 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 RESTQ13127 1097 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 RHEBQ15382 184 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 MED22Q15528 200 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 TAF13Q15543 124 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 PKN2Q16513 984 aaKnown RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 MIIPQ5JXC2 388 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 MTSS1LQ765P7 747 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 FOXP4Q8IVH2 680 aaPredicted RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 CLYBLQ8N0X4 340 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 MARVELD2Q8N4S9 558 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 SETD9Q8NE22 299 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 SLC30A5Q8TAD4 765 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 HELQQ8TDG4 1101 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 PTPRN2Q92932 1015 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 C12orf43Q96C57 262 aaKnown RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 PTCD3Q96EY7 689 aaKnown RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 TMEM87BQ96K49 555 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 C1QTNF1Q9BXJ1 281 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 WDR11Q9BZH6 1224 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 KRCC1Q9NPI7 259 aaPredicted RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 RDH8Q9NYR8 311 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 ADAM22Q9P0K1 906 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 AKAP7Q9P0M2 348 aaPredicted RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 MORF4L1Q9UBU8 362 aa3.35□□□□□ -1.87
PHF3-202ENST00000393387 RBM7Q9Y580 266 aaKnown RBP3.35□□□□□ -1.87
PHF3-202ENST00000393387 MROH5Q6ZUA9 1318 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 ZNF532Q9HCE3 1301 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 HFM1A2PYH4 1435 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 CECR2Q9BXF3 1484 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 IKBKBO14920 756 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 HSPA12AO43301 675 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 LTFP02788 710 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 UMPSP11172 480 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 PABPC1P11940 636 aaKnown RBP3.34□□□□□ -1.87
PHF3-202ENST00000393387 ADD2P35612 726 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 ITGA1P56199 1179 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 KCNJ2P63252 427 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 CAV1Q03135 178 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 CHRNDQ07001 517 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 XRCC4Q13426 336 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 TLR1Q15399 786 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 CCDC58Q4VC31 144 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 TIGD7Q6NT04 549 aaPredicted RBP3.34□□□□□ -1.87
PHF3-202ENST00000393387 ERAP2Q6P179 960 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 C3orf62Q6ZUJ4 267 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 PID1Q7Z2X4 250 aa3.34□□□□□ -1.87
PHF3-202ENST00000393387 DHFR2Q86XF0 187 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms