RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 FKBP1BP68106 108 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MED21Q13503 144 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 FASTKD1Q53R41 847 aaKnown RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MROH9Q5TGP6 573 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 ARCQ7LC44 396 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 PRRT2Q7Z6L0 340 aaPredicted RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 ZNF410Q86VK4 478 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 LCA5Q86VQ0 697 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 NUDCD3Q8IVD9 361 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 TMEM143Q96AN5 459 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 TMIGD2Q96BF3 282 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 DCUN1D1Q96GG9 259 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 KLHL32Q96NJ5 620 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 DNAJC16Q9Y2G8 782 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MYO18AQ92614 2054 aaKnown RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MAP3K6O95382 1288 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 PFKMP08237 780 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 HOXC6P09630 235 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 GLDCP23378 1020 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 PPIL2Q13356 520 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 ORC1Q13415 861 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 TBCCQ15814 346 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 ZNF423Q2M1K9 1284 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 LRRC23Q53EV4 343 aaPredicted RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 PPM1JQ5JR12 505 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 LDLRAD1Q5T700 205 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 VSIG10LQ86VR7 867 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 HSPH1Q92598 858 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 CDCA5Q96FF9 252 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MTMR12Q9C0I1 747 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 SORCS3Q9UPU3 1222 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 LZTS1Q9Y250 596 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MAD1L1Q9Y6D9 718 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 C7orf72A4D263 438 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 PLIN3O60664 434 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 INHBAP08476 426 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 ZNF26P17031 533 aaPredicted RBP11.77□□□□□ -0.53
PDCD4-202ENST00000393104 CDH2P19022 906 aaPredicted RBP11.77□□□□□ -0.53
PDCD4-202ENST00000393104 JAK3P52333 1124 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 RPL10AP62906 217 aaKnown RBP11.77□□□□□ -0.53
PDCD4-202ENST00000393104 HIC1Q14526 733 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 SLC9B1Q4ZJI4 515 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 WDR44Q5JSH3 913 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 PPM1LQ5SGD2 360 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 STXBP5Q5T5C0 1151 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 STEAP4Q687X5 459 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 C10orf107Q8IVU9 208 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 NDUFAF2Q8N183 169 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 SLC4A11Q8NBS3 891 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 PCDH19Q8TAB3 1148 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 SLC26A7Q8TE54 656 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 RANBP9Q96S59 729 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 SLX1AQ9BQ83 275 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 DHX33Q9H6R0 707 aaKnown RBP11.77□□□□□ -0.53
PDCD4-202ENST00000393104 RPAP3Q9H6T3 665 aaPredicted RBP11.77□□□□□ -0.53
PDCD4-202ENST00000393104 RAVER2Q9HCJ3 691 aaKnown RBP11.77□□□□□ -0.53
PDCD4-202ENST00000393104 FZD1Q9UP38 647 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 SLC45A1Q9Y2W3 748 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 H3BSA7 217 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 TRDMT1O14717 391 aaKnown RBP11.77□□□□□ -0.53
PDCD4-202ENST00000393104 CREB3O43889 395 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 SBK3P0C264 359 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 PSMA2P25787 234 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 RBL1P28749 1068 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 MAGEA12P43365 314 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 YWHAGP61981 247 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDCD4-202ENST00000393104 RSPH3Q86UC2 560 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 CPNE9Q8IYJ1 553 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 SLC7A3Q8WY07 619 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 ZNF518BQ9C0D4 1074 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 LHX5Q9H2C1 402 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 HES2Q9Y543 173 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 PCDHA10Q9Y5I2 948 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 TSC2P49815 1807 aa11.77□□□□□ -0.53
PDCD4-202ENST00000393104 TMX2-CTNND1H3BSU7 103 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 VWA5AO00534 786 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 ACOT8O14734 319 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 TFE3P19532 575 aaPredicted RBP11.76□□□□□ -0.53
PDCD4-202ENST00000393104 TBXAS1P24557 533 aaPredicted RBP11.76□□□□□ -0.53
PDCD4-202ENST00000393104 RAP1GAPP47736 663 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 SULT2A1Q06520 285 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 ITGA9Q13797 1035 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 SWSAP1Q6NVH7 229 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 DEFB107AQ8IZN7 70 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 ST13P4Q8IZP2 240 aaPredicted RBP11.76□□□□□ -0.53
PDCD4-202ENST00000393104 HIC2Q96JB3 615 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 OLFM3Q96PB7 478 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 DNAJC28Q9NX36 388 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 SIX4Q9UIU6 781 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.76□□□□□ -0.53
PDCD4-202ENST00000393104 MYLKQ15746 1914 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 PRSS51A0A1B0GVH4 220 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 MSCO60682 206 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 KRT3P12035 628 aa11.76□□□□□ -0.53
PDCD4-202ENST00000393104 PMLP29590 882 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms