RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 RBL1P28749 1068 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 GLRBP48167 497 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 MAP3K10Q02779 954 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 TMED1Q13445 227 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 PARP6Q2NL67 630 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 SCARA3Q6AZY7 606 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ABHD15Q6UXT9 468 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ILDR2Q71H61 639 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 COPS5Q92905 334 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 CLPBQ9H078 707 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 VPS28Q9UK41 221 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ABHD2P08910 425 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 CCDC130P13994 396 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.332e-9■■□□□ 12.6
CLTC-202ENST00000393043 PTPN1P18031 435 aaKnown RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 TUBP50607 506 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 CDK7P50613 346 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ITIH5Q86UX2 942 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 KCNMB4Q86W47 210 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 HS6ST3Q8IZP7 471 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 MYO1HQ8N1T3 1032 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 CELF6Q96J87 481 aaKnown RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 THAP1Q9NVV9 213 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ANKRD6Q9Y2G4 727 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 WDR27A2RRH5 827 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 FSCN2O14926 492 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ITGAVP06756 1048 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 TPBGLP0DKB5 382 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 MGAT1P26572 445 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 CRABP2P29373 138 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 RHOAP61586 193 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ITGA9Q13797 1035 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 SPDYE7PQ495Y7 208 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 N4BP2L1Q5TBK1 243 aaPredicted RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 CACHD1Q5VU97 1274 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 KIAA0319LQ8IZA0 1049 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 RFWD2Q8NHY2 731 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 SRPK1Q96SB4 655 aaKnown RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 SPATA16Q9BXB7 569 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ZNF446Q9NWS9 450 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 RAD54BQ9Y620 910 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 YWHAQP27348 245 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 CLK2P49760 499 aaKnown RBP12.96□□□□□ -0.33
CLTC-202ENST00000393043 PRKAA1Q13131 559 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 CYLC2Q14093 348 aaPredicted RBP12.96□□□□□ -0.33
CLTC-202ENST00000393043 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.33
CLTC-202ENST00000393043 PKN3Q6P5Z2 889 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 CARNMT1Q8N4J0 409 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 ALLCQ8N6M5 410 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 FAM162AQ96A26 154 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 C17orf80Q9BSJ5 609 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 SLC25A13Q9UJS0 675 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 KDM1AO60341 852 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 TBC1D4O60343 1298 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 CABYRO75952 493 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 ERBB2P04626 1255 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 HOXB8P17481 243 aaPredicted RBP12.96□□□□□ -0.33
CLTC-202ENST00000393043 RCN1Q15293 331 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 HIST2H2ACQ16777 129 aaPredicted RBP12.96□□□□□ -0.33
CLTC-202ENST00000393043 DUPD1Q68J44 220 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 HIST2H2AA3Q6FI13 130 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 LAYNQ6UX15 382 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 BNC2Q6ZN30 1099 aaPredicted RBP12.96□□□□□ -0.33
CLTC-202ENST00000393043 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 C18orf25Q96B23 403 aaPredicted RBP12.96□□□□□ -0.33
CLTC-202ENST00000393043 ULBP1Q9BZM6 244 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 UBP1Q9NZI7 540 aa12.96□□□□□ -0.33
CLTC-202ENST00000393043 LCA5LO95447 670 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 BBS12Q6ZW61 710 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.34
CLTC-202ENST00000393043 ART4Q93070 314 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 ABCC13Q9NSE7 274 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 ETNK2Q9NVF9 386 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 NMRK1Q9NWW6 199 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 SPEF2Q9C093 1822 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 TRIM13O60858 407 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 DDHD2O94830 711 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 NUDT17P0C025 328 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 NPR3P17342 541 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 CSHL1Q14406 222 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 POU6F1Q14863 301 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 WLSQ5T9L3 541 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 KYAT3Q6YP21 454 aaKnown RBP12.96□□□□□ -0.34
CLTC-202ENST00000393043 MTMR14Q8NCE2 650 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 JADE3Q92613 823 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 UROC1Q96N76 676 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 VTI1BQ9UEU0 232 aa12.96□□□□□ -0.34
CLTC-202ENST00000393043 FAM208AQ9UK61 1670 aaKnown RBP12.95□□□□□ -0.34
CLTC-202ENST00000393043 KANSL1LA0AUZ9 987 aa12.95□□□□□ -0.34
CLTC-202ENST00000393043 EIF4E1BA6NMX2 242 aaKnown RBP12.95□□□□□ -0.34
CLTC-202ENST00000393043 GOLGA8TH3BQL2 631 aa12.95□□□□□ -0.34
CLTC-202ENST00000393043 FARP2O94887 1054 aaPredicted RBP12.95□□□□□ -0.34
CLTC-202ENST00000393043 TRUB2O95900 331 aaKnown RBP12.95□□□□□ -0.34
CLTC-202ENST00000393043 SERPINB5P36952 375 aa12.95□□□□□ -0.34
CLTC-202ENST00000393043 RETSATQ6NUM9 610 aa12.95□□□□□ -0.34
CLTC-202ENST00000393043 AADACL2Q6P093 401 aa12.95□□□□□ -0.34
CLTC-202ENST00000393043 LRRC52Q8N7C0 313 aa12.95□□□□□ -0.34
CLTC-202ENST00000393043 ANKRD52Q8NB46 1076 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms