RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ACTL7BQ9Y614 415 aa3.71□□□□□ -1.82
XRN1-202ENST00000392981 ADCY6O43306 1168 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 MOCS3O95396 460 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SGPL1O95470 568 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CSF1P09603 554 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 KLRC1P26715 233 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 MAGEA10P43363 369 aaPredicted RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 KCNJ1P48048 391 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PMS2P54278 862 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 DSC2Q02487 901 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 DNAJC3Q13217 504 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 ABRAXAS1Q6UWZ7 409 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 C8orf86Q6ZUL3 223 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SCN4BQ8IWT1 228 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 DCBLD1Q8N8Z6 715 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 INTS12Q96CB8 462 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 CFAP36Q96G28 342 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PGBD1Q96JS3 809 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 DDX47Q9H0S4 455 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 LRRC4CQ9HCJ2 640 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 MID1IP1Q9NPA3 183 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 AMACRQ9UHK6 382 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CAB39Q9Y376 341 aaPredicted RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 PCDHB2Q9Y5E7 798 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 RPTORQ8N122 1335 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CUX2O14529 1486 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TRIM43BA6NCK2 446 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 GOLGA8SH3BPF8 625 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 H7BY64 318 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CAPN9O14815 690 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 HS6ST1O60243 411 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CLASP2O75122 1294 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 ERN1O75460 977 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 VIMP08670 466 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 TPBGLP0DKB5 382 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 BMP8BP34820 402 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 GNAQP50148 359 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 RAC1P63000 192 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 RIPK1Q13546 671 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 NAB2Q15742 525 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 FAM171A1Q5VUB5 890 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SFMBT2Q5VUG0 894 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SPRYD7Q5W111 196 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CREB3L3Q68CJ9 461 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CASC4Q6P4E1 433 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TRIM48Q8IWZ4 208 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PDCL2Q8N4E4 241 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 LSM14AQ8ND56 463 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 CADM4Q8NFZ8 388 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 GCDHQ92947 438 aaPredicted RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 TRIM43Q96BQ3 446 aaPredicted RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 FER1L6-AS2Q96M78 137 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TPPP3Q9BW30 176 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 RIBC2Q9H4K1 309 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 RPAP3Q9H6T3 665 aaPredicted RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 NRDE2Q9H7Z3 1164 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PRDM8Q9NQV8 689 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SELENONQ9NZV5 590 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 MORF4L1Q9UBU8 362 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 DNMT3LQ9UJW3 386 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 NUDCQ9Y266 331 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 NUMBLQ9Y6R0 609 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 SHROOM2Q13796 1616 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 KCNJ18B7U540 433 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 UBE2CO00762 179 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 FAM87AP0C7U9 286 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TFEBP19484 476 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CHRNA3P32297 505 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CCT6AP40227 531 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 SLC11A2P49281 568 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 DIO1P49895 249 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 FOXO4P98177 505 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PTSQ03393 145 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PPATQ06203 517 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 EGR3Q06889 387 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TBL3Q12788 808 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 TARDBPQ13148 414 aaKnown RBP eCLIP3.7□□□□□ -1.823e-23■■■■■ 39.5
XRN1-202ENST00000392981 CUL1Q13616 776 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 KCNJ12Q14500 433 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 ZNF468Q5VIY5 522 aaPredicted RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 RCSD1Q6JBY9 416 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CES5AQ6NT32 575 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 ZNF529Q6P280 563 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 MTHFD1LQ6UB35 978 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PLPPR4Q7Z2D5 763 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CROCCP3Q8IVE0 287 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 UBE2FQ969M7 185 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 EDC3Q96F86 508 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 MRPL46Q9H2W6 279 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 SLC6A20Q9NP91 592 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 CHRAC1Q9NRG0 131 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 ATP2A1O14983 1001 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 EIF2S1P05198 315 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 HSPA8P11142 646 aaKnown RBP3.7□□□□□ -1.82
XRN1-202ENST00000392981 HGFP14210 728 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PTGS1P23219 599 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 PRDX5P30044 214 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 TRPC1P48995 793 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 FLT3LGP49771 235 aa3.7□□□□□ -1.82
XRN1-202ENST00000392981 ZNF41P51814 821 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms