RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 LGI2Q8N0V4 545 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TSEN2Q8NCE0 465 aaKnown RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 MYLPFQ96A32 169 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 PCDHB18PQ96TA0 734 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 KIF17Q9P2E2 1029 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 LIASO43766 372 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 GLP2RO95838 553 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 BGNP21810 368 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 CPA2P48052 419 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TMEM139Q8IV31 216 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 NUP93Q8N1F7 819 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 FAM136AQ96C01 138 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 ADGRE3Q9BY15 652 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 SERPIND1P05546 499 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 PPP3CCP48454 512 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 SDE2Q6IQ49 451 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 ANKRD52Q8NB46 1076 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 DTX3LQ8TDB6 740 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 M0R2N6 131 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCN3B-202ENST00000392770 DEFB115Q30KQ5 88 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 SGO1Q5FBB7 561 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 LRRC38Q5VT99 294 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 ASPSCR1Q9BZE9 553 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 O00370 1275 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 VPS26AO75436 327 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 IL10P22301 178 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 MTA1Q13330 715 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 SPANXN3Q5MJ09 141 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 C9orf57Q5W0N0 161 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 ETNK2Q9NVF9 386 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 TUBGCP4Q9UGJ1 667 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 PCDHGB4Q9UN71 923 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 ARHGAP10A1A4S6 786 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 C4BPAP04003 597 aaKnown RBP17.03■□□□□ 0.32
SCN3B-202ENST00000392770 RARS2Q5T160 578 aaKnown RBP17.03■□□□□ 0.32
SCN3B-202ENST00000392770 PGBD3Q8N328 593 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 LPCAT1Q8NF37 534 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 WWOXQ9NZC7 414 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 DERAQ9Y315 318 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 TRPM3Q9HCF6 1732 aaPredicted RBP17.03■□□□□ 0.32
SCN3B-202ENST00000392770 KLRC2P26717 231 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 PPP1R26Q5T8A7 1209 aaPredicted RBP17.03■□□□□ 0.32
SCN3B-202ENST00000392770 ARHGAP28Q9P2N2 729 aa17.03■□□□□ 0.32
SCN3B-202ENST00000392770 KCNK1O00180 336 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 ONECUT3O60422 494 aaPredicted RBP17.02■□□□□ 0.32
SCN3B-202ENST00000392770 RPL7AP62424 266 aaKnown RBP17.02■□□□□ 0.32
SCN3B-202ENST00000392770 LZTR1Q8N653 840 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 HEY2Q9UBP5 337 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 PCYOX1Q9UHG3 505 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 SLC4A7Q9Y6M7 1214 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 GRTP1Q5TC63 336 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 ADCK2Q7Z695 626 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 PRUNE1Q86TP1 453 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 SPATA17Q96L03 361 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 SNRNP25Q9BV90 132 aaKnown RBP17.02■□□□□ 0.32
SCN3B-202ENST00000392770 RIC8BQ9NVN3 520 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 SMPD4Q9NXE4 827 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 CLDN5O00501 218 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.32
SCN3B-202ENST00000392770 ERBB2P04626 1255 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 ZBTB48P10074 688 aaPredicted RBP17.02■□□□□ 0.32
SCN3B-202ENST00000392770 NLRP9Q7RTR0 991 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 KCNMB4Q86W47 210 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 ALLCQ8N6M5 410 aa17.02■□□□□ 0.32
SCN3B-202ENST00000392770 FZD9O00144 591 aa17.02■□□□□ 0.31
SCN3B-202ENST00000392770 SUPT7LO94864 414 aa17.02■□□□□ 0.31
SCN3B-202ENST00000392770 MPOP05164 745 aa17.02■□□□□ 0.31
SCN3B-202ENST00000392770 IKBKEQ14164 716 aa17.02■□□□□ 0.31
SCN3B-202ENST00000392770 INPP5AQ14642 412 aa17.02■□□□□ 0.31
SCN3B-202ENST00000392770 PIGZQ86VD9 579 aa17.02■□□□□ 0.31
SCN3B-202ENST00000392770 FAF1Q9UNN5 650 aaPredicted RBP17.02■□□□□ 0.31
SCN3B-202ENST00000392770 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.31
SCN3B-202ENST00000392770 NPY2RP49146 381 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 SLC45A4Q5BKX6 768 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 SPRYD7Q5W111 196 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 EFL1Q7Z2Z2 1120 aaKnown RBP17.01■□□□□ 0.31
SCN3B-202ENST00000392770 HSFY1Q96LI6 401 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 C12orf42Q96LP6 360 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 KCNK16Q96T55 309 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 ATXN3P54252 364 aaPredicted RBP17.01■□□□□ 0.31
SCN3B-202ENST00000392770 ZCWPW2Q504Y3 356 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 CES3Q6UWW8 571 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 APBB2Q92870 758 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 CYP4F12Q9HCS2 524 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 SKAP2O75563 359 aaPredicted RBP17.01■□□□□ 0.31
SCN3B-202ENST00000392770 FLT3LGP49771 235 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 RENBPP51606 427 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 JAM2P57087 298 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 TAS2R40P59535 323 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 IFI35P80217 286 aaPredicted RBP17.01■□□□□ 0.31
SCN3B-202ENST00000392770 MMRN1Q13201 1228 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 SPDYCQ5MJ68 293 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 PDZD7Q9H5P4 517 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 ATP13A1Q9HD20 1204 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 LOC100653049A0A140TA62 436 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 ADCY6O43306 1168 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 KRT34O76011 436 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 IFNA8P32881 189 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms