RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 DSEQ9UL01 958 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 TBX3O15119 743 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 EXTL3O43909 919 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 CTDNEP1O95476 244 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 RPA3P35244 121 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 TWF1Q12792 350 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 ZC2HC1CQ53FD0 456 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 SLC7A14Q8TBB6 771 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 PDCD10Q9BUL8 212 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 VPS4BO75351 444 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 PRKAR1AP10644 381 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 TRAP1Q12931 704 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 HIST2H2ACQ16777 129 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 FAXCQ5TGI0 409 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 GPR107Q5VW38 600 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 HIST2H2AA3Q6FI13 130 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 FBXW8Q8N3Y1 598 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 AP3S1Q92572 193 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 STX11O75558 287 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 LRPAP1P30533 357 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 GALK1P51570 392 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 PYDC2Q56P42 97 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 MAGEE2Q8TD90 523 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 GAS2O43903 313 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 KRT36O76013 467 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 GSSP48637 474 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 TYSND1Q2T9J0 566 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 C16orf62Q7Z3J2 963 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 NCF1BA6NI72 391 aaPredicted RBP12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 NCF1CA8MVU1 366 aaPredicted RBP12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 NCF1P14598 390 aaPredicted RBP12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 GRTP1Q5TC63 336 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 CDKAL1Q5VV42 579 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 ADCK2Q7Z695 626 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 TTC7BQ86TV6 843 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 CREG2Q8IUH2 290 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 LIMD1Q9UGP4 676 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 PNMA8BQ9ULN7 279 aaPredicted RBP12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 DGAT1O75907 488 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 SNX32Q86XE0 403 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 ACAD9Q9H845 621 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 ZNF221Q9UK13 617 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 ACOT9Q9Y305 439 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 CCDC166P0CW27 439 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 CDK7P50613 346 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 SIK1P57059 783 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 TTLL9Q3SXZ7 439 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 A1CFQ9NQ94 594 aaKnown RBP12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 CCDC167Q9P0B6 97 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 TPBGLP0DKB5 382 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 ERVK-9P63128 1117 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 RUNDC3AQ59EK9 446 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 EPHA10Q5JZY3 1008 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 STX12Q86Y82 276 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 ZHX1-C8orf76Q96EF9 292 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 AFF2P51816 1311 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 IGSF9BQ9UPX0 1349 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 H3BNX3 289 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 RNF148Q8N7C7 305 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 TPD52L3Q96J77 140 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 TEX13BQ9BXU2 312 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 DCLK3Q9C098 648 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 SQORQ9Y6N5 450 aa12.71□□□□□ -0.37
SRGAP3-202ENST00000383836 OVOS2A0A0G2JMS6 1433 aa12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 USP6P35125 1406 aa12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 BCAP31P51572 246 aa12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 TRMT13Q9NUP7 481 aaKnown RBP12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 COMMD9Q9P000 198 aa12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 SNX8Q9Y5X2 465 aa12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 ZC3H4Q9UPT8 1303 aaKnown RBP12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 MSH3P20585 1137 aa12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 PTGS2P35354 604 aa12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 MAP3K14Q99558 947 aa12.71□□□□□ -0.38
SRGAP3-202ENST00000383836 MATN2O00339 956 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 CYP11B1P15538 503 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 MAD2L1Q13257 205 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 MPP3Q13368 585 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 ZNF544Q6NX49 715 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 EIF3MQ7L2H7 374 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 GRPEL2Q8TAA5 225 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 CNKSR1Q969H4 720 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 ZNF608Q9ULD9 1512 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 C15orf38-AP3S2A0A0A6YYH1 394 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 SAGE2PA6NJ88 616 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 C2orf81A6NN90 581 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 INO80DQ53TQ3 878 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 DENND5AQ6IQ26 1287 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 ARPINQ7Z6K5 226 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 CCDC36Q8IYA8 594 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 SLC25A23Q9BV35 468 aa12.7□□□□□ -0.38
SRGAP3-202ENST00000383836 FOXN3O00409 490 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms