RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ABHD8Q96I13 439 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 AGBL1Q96MI9 1066 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 COG8Q96MW5 612 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 CSRNP1Q96S65 589 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 TIMM29Q9BSF4 260 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 C12orf65Q9H3J6 166 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 DCP1AQ9NPI6 582 aaPredicted RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 RNF19AQ9NV58 838 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 HBS1LQ9Y450 684 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 NR2E3Q9Y5X4 410 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 FAM205AQ6ZU69 1335 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 LAMA4Q16363 1823 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 KDM4FA0A1W2PPD8 638 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 ECDO95905 644 aaPredicted RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 KCNJ1P48048 391 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 ARSEP51690 589 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 CAPZA1P52907 286 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 LSAMPQ13449 338 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 NDUFA5Q16718 116 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 BBS9Q3SYG4 887 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 KHDC1Q4VXA5 237 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 RBM44Q6ZP01 1051 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 TDRPQ86YL5 185 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 DENND6AQ8IWF6 608 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 UBQLNLQ8IYU4 475 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PRELID2Q8N945 189 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 RAB24Q969Q5 203 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 MRPL1Q9BYD6 325 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 PREBQ9HCU5 417 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 NIP7Q9Y221 180 aaKnown RBP eCLIP5.87□□□□□ -1.47
RFC1-202ENST00000381897 TOPAZ1Q8N9V7 1692 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 RNF103-CHMP3A0A140T963 221 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 RNF103O00237 685 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PRLP01236 227 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 TSHRP16473 764 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 HADHBP55084 474 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 FUT2Q10981 343 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 ART3Q13508 389 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PDCD4Q53EL6 469 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 PRR16Q569H4 304 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 DCAF15Q66K64 600 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 LRRC8BQ6P9F7 803 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 VSTM1Q6UX27 236 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 BCL9LQ86UU0 1499 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 THAP3Q8WTV1 239 aaPredicted RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 FAM20AQ96MK3 541 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 APBA2Q99767 749 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 TMEM47Q9BQJ4 181 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 TXLNGYQ9BZA5 131 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 UPF3AQ9H1J1 476 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 COPS7BQ9H9Q2 264 aaPredicted RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 TMEM165Q9HC07 324 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 LMCD1Q9NZU5 365 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 GMIPQ9P107 970 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PCSK1NQ9UHG2 260 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 AK5Q9Y6K8 562 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 ROBO3Q96MS0 1386 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PCP4L1A6NKN8 68 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 A6NL46 340 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PRAMEF4O60810 478 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 NOL4O94818 638 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 ALOX15P16050 662 aaPredicted RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 PSMC3P17980 439 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PTGIRP43119 386 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 HPCAP84074 193 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 LRRC36Q1X8D7 754 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 CEP55Q53EZ4 464 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 CFAP161Q6P656 301 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 ZDHHC24Q6UX98 284 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 TRABD2AQ86V40 505 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 OLFM1Q99784 485 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 POLR3CQ9BUI4 534 aaPredicted RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 FRMD8Q9BZ67 464 aaPredicted RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 DCLK3Q9C098 648 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 CHODLQ9H9P2 273 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PCMTD2Q9NV79 361 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 ATAD3AQ9NVI7 634 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 GRHL1Q9NZI5 618 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 FKBPLQ9UIM3 349 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 SYNPO2Q9UMS6 1093 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 SHOC2Q9UQ13 582 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 TDRKHQ9Y2W6 561 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 MRPL11Q9Y3B7 192 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 KIF1AQ12756 1690 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 TRBV23-1A0A0A0MS06 115 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 TNPO2O14787 897 aaKnown RBP5.86□□□□□ -1.47
RFC1-202ENST00000381897 KCNQ2O43526 872 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 NMT2O60551 498 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 PEX2P28328 305 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 SERPINB9P50453 376 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 NCKAP1LP55160 1127 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 STX5Q13190 355 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 STX3Q13277 289 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 LPIN1Q14693 890 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 MYBPC3Q14896 1274 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 PLCL1Q15111 1095 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 CYP1B1Q16678 543 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 FAM182BQ5T319 152 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 SCYL2Q6P3W7 929 aa5.86□□□□□ -1.47
RFC1-202ENST00000381897 FRA10AC1Q70Z53 315 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms