RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 BEX3Q00994 111 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 LRRC36Q1X8D7 754 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 CCDC14Q49A88 953 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 IZUMO2Q6UXV1 221 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ATG14Q6ZNE5 492 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 TMPRSS6Q8IU80 811 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ADGRF2Q8IZF7 708 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 DNAJB3Q8WWF6 145 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 NDRG1Q92597 394 aaKnown RBP16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 PGLYRP2Q96PD5 576 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 CNPY3Q9BT09 278 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 NT5C1AQ9BXI3 368 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 PAK5Q9P286 719 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 WDR35Q9P2L0 1181 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 F7P08709 466 aaPredicted RBP16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 LCP1P13796 627 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 ANPEPP15144 967 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 PRKCHP24723 683 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 GSTCDQ8NEC7 633 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 PPTC7Q8NI37 304 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 USP6NLQ92738 828 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 ZNF778Q96MU6 729 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 DPEP3Q9H4B8 488 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 PNPLA8Q9NP80 782 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 SCOCQ9UIL1 159 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 MFHAS1Q9Y4C4 1052 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 PPME1Q9Y570 386 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 MYO18AQ92614 2054 aaKnown RBP16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 RAP1GDS1P52306 607 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 GBE1Q04446 702 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 PMF1Q6P1K2 205 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 PPFIBP2Q8ND30 876 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 IFT43Q96FT9 208 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 CCDC106Q9BWC9 280 aa16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 PAPOLBQ9NRJ5 636 aaKnown RBP16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
NKX3-1-201ENST00000380871 PTPRFP10586 1907 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 C6orf222P0C671 652 aaPredicted RBP16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 VDRP11473 427 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 GABRB2P47870 512 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 PEX6Q13608 980 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 C1orf146Q5VVC0 180 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 CLEC4CQ8WTT0 213 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 PCDH18Q9HCL0 1135 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 TAGLN3Q9UI15 199 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 PIN4Q9Y237 131 aaKnown RBP16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 A8MXQ7 604 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 SPECC1L-ADORA2AF8WAN1 911 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 APOL1O14791 398 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 SPAG6O75602 509 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 IL1BP01584 269 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 FESP07332 822 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 CYP2C9P11712 490 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 KCNA4P22459 653 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 RABGGTBP53611 331 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 INHBEP58166 350 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 RPL10AP62906 217 aaKnown RBP16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 TFDP2Q14188 446 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 MARCH8Q5T0T0 291 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 SLC30A9Q6PML9 568 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 CRLF3Q8IUI8 442 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 FAM172AQ8WUF8 416 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 SNRNP25Q9BV90 132 aaKnown RBP16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 KLC2Q9H0B6 622 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 WWP1Q9H0M0 922 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 ASB7Q9H672 318 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 ZNF212Q9UDV6 495 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 WDR90Q96KV7 1748 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 TRIP11Q15643 1979 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 TM7SF2O76062 418 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 BPGMP07738 259 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 CCDC130P13994 396 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 CCNFP41002 786 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 SLC10A2Q12908 348 aaPredicted RBP16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 RALGPS1Q5JS13 557 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 ZNF618Q5T7W0 954 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 ATG16L1Q676U5 607 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 EFCAB3Q8N7B9 438 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 STKLD1Q8NE28 680 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 CXorf38Q8TB03 319 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 GATA6Q92908 595 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 MAF1Q9H063 256 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 VTA1Q9NP79 307 aa16.78■□□□□ 0.28
NKX3-1-201ENST00000380871 SNNO75324 88 aaPredicted RBP16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 PFKMP08237 780 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 MMP3P08254 477 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 CYP2B6P20813 491 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 PDE1BQ01064 536 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 FAM47CQ5HY64 1035 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 RAPH1Q70E73 1250 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 PYDC1Q8WXC3 89 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 MAML3Q96JK9 1138 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 SIGLEC10Q96LC7 697 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 TINF2Q9BSI4 451 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 ZNF180Q9UJW8 692 aa16.77■□□□□ 0.28
NKX3-1-201ENST00000380871 CEP350Q5VT06 3117 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms