RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ZFYVE19Q96K21 471 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 C1orf50Q9BV19 199 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 GCOM2Q9BZD3 368 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 JAG2Q9Y219 1238 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 MAU2Q9Y6X3 613 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 C12orf71A8MTZ7 269 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 ERVH48-1M5A8F1 160 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 CIAO1O76071 339 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 SNRPAP09012 282 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 MCF2P10911 925 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 CDKL1Q00532 357 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 NT5DC3Q86UY8 548 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 OR10Z1Q8NGY1 313 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 KCTD4Q8WVF5 259 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 RMND5BQ96G75 393 aaPredicted RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 SLC39A13Q96H72 371 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 DEPDC7Q96QD5 511 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 TRIM56Q9BRZ2 755 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 EMILIN2Q9BXX0 1053 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 CASZ1Q86V15 1759 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 PNMA6FA0A0J9YX94 578 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 HLA-DRAP01903 254 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 EIF2AK2P19525 551 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 KLRK1P26718 216 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 NUDT1P36639 197 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 OR3A3P47888 321 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 EIF3EP60228 445 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 NME3Q13232 169 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 MAPRE1Q15691 268 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 KCNT1Q5JUK3 1230 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 UGT3A1Q6NUS8 523 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 BTLAQ7Z6A9 289 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 SNX29P2Q8IUI4 249 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 RELL1Q8IUW5 271 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 CCDC105Q8IYK2 499 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 PYM1Q9BRP8 204 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 BEGAINQ9BUH8 593 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 FOXP3Q9BZS1 431 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 CXorf21Q9HAI6 301 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 SLC35C2Q9NQQ7 365 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 ZC4H2Q9NQZ6 224 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 DDX28Q9NUL7 540 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 PPP1R1BQ9UD71 204 aaPredicted RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 XPO7Q9UIA9 1087 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 SMG5Q9UPR3 1016 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 TRAV6A0A075B6T7 132 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 DCAF8L1A6NGE4 600 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 AURKAO14965 403 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 YKT6O15498 198 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 MAP4P27816 1152 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 RRM2P31350 389 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 CHRNA3P32297 505 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 GJC1P36383 396 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 GNL1P36915 607 aaPredicted RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 HSPA13P48723 471 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 PTPN5P54829 565 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 SLC25A3Q00325 362 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 TAP1Q03518 808 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 CTTNQ14247 550 aaKnown RBP9.63□□□□□ -0.87
PTPRA-204ENST00000380393 MAN2A1Q16706 1144 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 ARHGAP44Q17R89 818 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 FAM47AQ5JRC9 791 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 FAM83BQ5T0W9 1011 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 UNC5AQ6ZN44 842 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 TRABD2AQ86V40 505 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 NUDCD3Q8IVD9 361 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 SLC4A11Q8NBS3 891 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 MAML1Q92585 1016 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 PLA2G12BQ9BX93 195 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 TSSK1BQ9BXA7 367 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 KCNN2Q9H2S1 579 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 TIGARQ9NQ88 270 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 PCDHGA10Q9Y5H3 936 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 GJA3Q9Y6H8 435 aa9.63□□□□□ -0.87
PTPRA-204ENST00000380393 C4AP0C0L4 1744 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 BTNL10A8MVZ5 291 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ACOX3O15254 700 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 SORBS2O94875 1100 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 C8BP07358 591 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ASNSP08243 561 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ASIC2Q16515 512 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 C10orf62Q5T681 223 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 CCDC137Q6PK04 289 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 PRPF39Q86UA1 669 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 CCNYL1Q8N7R7 359 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 KIAA1958Q8N8K9 716 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 PJA1Q8NG27 643 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 CCDC120Q96HB5 630 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 TXNDC15Q96J42 360 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 NACC1Q96RE7 527 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ALG13Q9NP73 1137 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 MRPL40Q9NQ50 206 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 THG1LQ9NWX6 298 aaKnown RBP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 AREL1O15033 823 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 PRPF4O43172 522 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPRA-204ENST00000380393 DYRK3O43781 588 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 ZBTB7AO95365 584 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 BCL10O95999 233 aa9.62□□□□□ -0.87
PTPRA-204ENST00000380393 CYP7A1P22680 504 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms