RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CCDC28BQ9BUN5 200 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 HES2Q9Y543 173 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 LTBP1Q14766 1721 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 A8MXQ7 604 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 GPR25O00155 361 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 BUD23O43709 281 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 HOXC6P09630 235 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 PEX2P28328 305 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 ADORA2AP29274 412 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 HOXD12P35452 270 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 PPM1JQ5JR12 505 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 GRAMD4Q6IC98 578 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 DENND5BQ6ZUT9 1274 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 PDSS2Q86YH6 399 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 WDR49Q8IV35 697 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 METTL25Q8N6Q8 603 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 GSTCDQ8NEC7 633 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 ZFP28Q8NHY6 868 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 DEPDC1BQ8WUY9 529 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 ABHD8Q96I13 439 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC7A8Q9UHI5 535 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 AKT3Q9Y243 479 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 GOLGA8TH3BQL2 631 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 CIB2O75838 187 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 TRUB2O95900 331 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 DLDP09622 509 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 C6orf222P0C671 652 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 ADORA2BP29275 332 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 NDST1P52848 882 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 CCDC92Q53HC0 331 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 FAM183BPQ6ZVS7 135 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 PCGF5Q86SE9 256 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 TMEM110Q86TL2 294 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 TDRPQ86YL5 185 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 ZNF276Q8N554 614 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 FAM172AQ8WUF8 416 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 CDHR1Q96JP9 859 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 XYLT2Q9H1B5 865 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 KIAA1217Q5T5P2 1943 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 DNAJC6O75061 913 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 KRT37O76014 449 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 METTL18O95568 372 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 LCP1P13796 627 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 PSMD7P51665 324 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 ASPHQ12797 758 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 RALGPS1Q5JS13 557 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 IL31Q6EBC2 164 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 TSHZ1Q6ZSZ6 1077 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 ULK2Q8IYT8 1036 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 PYROXD2Q8N2H3 581 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 RNF148Q8N7C7 305 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC4A11Q8NBS3 891 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 FAM149B1Q96BN6 582 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 MTBPQ96DY7 904 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 BRD8Q9H0E9 1235 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 LIN28AQ9H9Z2 209 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 PDGFCQ9NRA1 345 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 TSPAN16Q9UKR8 245 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 MAFBQ9Y5Q3 323 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 SNX9Q9Y5X1 595 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 LY75O60449 1722 aa12.85□□□□□ -0.35
PRPF40B-202ENST00000380281 COL4A5P29400 1685 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 A0A087WZ62 844 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 C15orf38-AP3S2A0A0A6YYH1 394 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 APOC4-APOC2K7ER74 178 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 FARP2O94887 1054 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 CLPTM1O96005 669 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 APOC2P02655 101 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 TFAP2AP05549 437 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 UQCRBP14927 111 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 OSBPP22059 807 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 CD97P48960 835 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 ZNF132P52740 706 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 YWHAZP63104 245 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 PDE1BQ01064 536 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 C6orf163Q5TEZ5 329 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 RNF111Q6ZNA4 994 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 ARPINQ7Z6K5 226 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC26A7Q8TE54 656 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 PRICKLE1Q96MT3 831 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 GCNAQ96QF7 691 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 APOL2Q9BQE5 337 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 FDXACB1Q9BRP7 624 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 FOXP3Q9BZS1 431 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 VPS11Q9H270 941 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 TTLL3Q9Y4R7 772 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 PDE4DIPQ5VU43 2346 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 TCRBV5S1A1TA0A578 114 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 MAFGO15525 162 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms