RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 RHBDF2Q6PJF5 856 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 BBS12Q6ZW61 710 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 DHDDSQ86SQ9 333 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 LCA5Q86VQ0 697 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 CCNJLQ8IV13 435 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 OR6Y1Q8NGX8 325 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 SLC44A1Q8WWI5 657 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 CPXM1Q96SM3 734 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 CCT7Q99832 543 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 GRIP2Q9C0E4 1043 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 CAAP1Q9H8G2 361 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 FBXL21Q9UKT6 434 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 GIPC1O14908 333 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 DHX15O43143 795 aaKnown RBP11.71□□□□□ -0.53
SMAD9-202ENST00000379826 B4GALT5O43286 388 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 USP12O75317 370 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 LRCH4O75427 683 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 CLPTM1O96005 669 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 TPH1P17752 444 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 BACE1P56817 501 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 TMEM259Q4ZIN3 620 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 C10orf107Q8IVU9 208 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-202ENST00000379826 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 RUVBL2Q9Y230 463 aaKnown RBP11.71□□□□□ -0.53
SMAD9-202ENST00000379826 PEX10O60683 326 aa11.71□□□□□ -0.54
SMAD9-202ENST00000379826 F7P08709 466 aaPredicted RBP11.71□□□□□ -0.54
SMAD9-202ENST00000379826 NME5P56597 212 aa11.71□□□□□ -0.54
SMAD9-202ENST00000379826 RALGPS1Q5JS13 557 aa11.71□□□□□ -0.54
SMAD9-202ENST00000379826 HAUS8Q9BT25 410 aa11.71□□□□□ -0.54
SMAD9-202ENST00000379826 UBE2OQ9C0C9 1292 aaKnown RBP11.71□□□□□ -0.54
SMAD9-202ENST00000379826 UPF3AQ9H1J1 476 aaKnown RBP11.71□□□□□ -0.54
SMAD9-202ENST00000379826 SLC17A6Q9P2U8 582 aa11.71□□□□□ -0.54
SMAD9-202ENST00000379826 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.54
SMAD9-202ENST00000379826 CNTNAP2Q9UHC6 1331 aa11.71□□□□□ -0.54
SMAD9-202ENST00000379826 WNT10BO00744 389 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 SERPINE1P05121 402 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 TFE3P19532 575 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 MLH1P40692 756 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 NUMBP49757 651 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 YWHAZP63104 245 aaKnown RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 CYLC2Q14093 348 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 BNC2Q6ZN30 1099 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 UNC5AQ6ZN44 842 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 ASRGL1Q7L266 308 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 VSIG10LQ86VR7 867 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 SLC7A14Q8TBB6 771 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 TBX10O75333 385 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 LYPLA2O95372 231 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 FGFR3P22607 806 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 IL1R2P27930 398 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 MRPS22P82650 360 aaKnown RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 ROR2Q01974 943 aaKnown RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 ARL13BQ3SXY8 428 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 KCNT2Q6UVM3 1135 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 PTPRN2Q92932 1015 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 GORASP1Q9BQQ3 440 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 CLIC5Q9NZA1 410 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 PLLPQ9Y342 182 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 RNF103-CHMP3A0A140T963 221 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 ASB14A6NK59 587 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 ZNF862O60290 1169 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 HUS1O60921 280 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 NEK3P51956 506 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 HDAC4P56524 1084 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 XYLT1Q86Y38 959 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 RNF168Q8IYW5 571 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 GABPB2Q8TAK5 448 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 SYT15Q9BQS2 421 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 EBF4Q9BQW3 602 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 MRPL1Q9BYD6 325 aaKnown RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 EBF3Q9H4W6 596 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 STX18Q9P2W9 335 aaKnown RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 LNPEPQ9UIQ6 1025 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 MAST2Q6P0Q8 1798 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 COL22A1Q8NFW1 1626 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 SERPINA6P08185 405 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 IVDP26440 423 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 SERPINB8P50452 374 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 PLOD1Q02809 727 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 PDK3Q15120 406 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 C12orf29Q8N999 325 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 GANCQ8TET4 914 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 ZNF483Q8TF39 744 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 DIS3LQ8TF46 1054 aaKnown RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 CDCA5Q96FF9 252 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 TAS2R1Q9NYW7 299 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 KLK14Q9P0G3 267 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 RAB23Q9ULC3 237 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 HBS1LQ9Y450 684 aaKnown RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 OASLQ15646 514 aaKnown RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 KLC3Q6P597 504 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 MTHFD1LQ6UB35 978 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 ERO1BQ86YB8 467 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 FBXO16Q8IX29 292 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 CATSPER1Q8NEC5 780 aa11.7□□□□□ -0.54
SMAD9-202ENST00000379826 ILKAPQ9H0C8 392 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 MMADHCQ9H3L0 296 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-202ENST00000379826 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms