RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 GTSE1Q9NYZ3 720 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 TMEM216Q9P0N5 145 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 TSR3Q9UJK0 312 aaKnown RBP11.91□□□□□ -0.5
SEC23B-204ENST00000377475 STX16-NPEPL1H3BU86 382 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 CLDN5O00501 218 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 MAGEB2O15479 319 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 MAFGO15525 162 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 FARP2O94887 1054 aaPredicted RBP11.91□□□□□ -0.5
SEC23B-204ENST00000377475 RALBP11234 206 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 INSRRP14616 1297 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 CD1EP15812 388 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 PRAMEP78395 509 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 PPM1LQ5SGD2 360 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 CES4AQ5XG92 561 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 TRNP1Q6NT89 227 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 ST13P4Q8IZP2 240 aaPredicted RBP11.91□□□□□ -0.5
SEC23B-204ENST00000377475 SNRNP27Q8WVK2 155 aaKnown RBP11.91□□□□□ -0.5
SEC23B-204ENST00000377475 AGAP2Q99490 1192 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 PCDH18Q9HCL0 1135 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 SNTG2Q9NY99 539 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 SOX13Q9UN79 622 aa11.91□□□□□ -0.5
SEC23B-204ENST00000377475 HBS1LQ9Y450 684 aaKnown RBP11.91□□□□□ -0.5
SEC23B-204ENST00000377475 RREB1Q92766 1687 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 SLC15A5A6NIM6 579 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 IQCF3P0C7M6 154 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 ACADSP16219 412 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 RTP1P59025 263 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 PITX1P78337 314 aaPredicted RBP11.9□□□□□ -0.5
SEC23B-204ENST00000377475 CACNB2Q08289 660 aaPredicted RBP11.9□□□□□ -0.5
SEC23B-204ENST00000377475 NOMO1Q15155 1222 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 LRRC38Q5VT99 294 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 IRGCQ6NXR0 463 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 CATSPER4Q7RTX7 472 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 STRA8Q7Z7C7 330 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 CCDC185Q8N715 623 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 PTCD3Q96EY7 689 aaKnown RBP11.9□□□□□ -0.5
SEC23B-204ENST00000377475 LRGUKQ96M69 825 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 COPS7BQ9H9Q2 264 aaPredicted RBP11.9□□□□□ -0.5
SEC23B-204ENST00000377475 SIX4Q9UIU6 781 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 SNX10Q9Y5X0 201 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 TEX264Q9Y6I9 313 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 V9GYQ6 96 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 SCN9AQ15858 1988 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 MAST2Q6P0Q8 1798 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 SMAPO00193 183 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 SULT1E1P49888 294 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 DLG1Q12959 904 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 CDC16Q13042 620 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 ART3Q13508 389 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 ZNF460Q14592 562 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 CCDC14Q49A88 953 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.5
SEC23B-204ENST00000377475 TRIM42Q8IWZ5 723 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 ICA1LQ8NDH6 482 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 PIWIL2Q8TC59 973 aaKnown RBP11.9□□□□□ -0.5
SEC23B-204ENST00000377475 SKA1Q96BD8 255 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 ECSITQ9BQ95 431 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 XPNPEP3Q9NQH7 507 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 NUDT5Q9UKK9 219 aa11.9□□□□□ -0.5
SEC23B-204ENST00000377475 C9JVG2 144 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 ZNF143P52747 638 aaPredicted RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 TMED1Q13445 227 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 CNGA3Q16281 694 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 IER5Q5VY09 327 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 CYP2R1Q6VVX0 501 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 RPS27LQ71UM5 84 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 PCDH20Q8N6Y1 951 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 EDEM1Q92611 657 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 VCX3BQ9H321 246 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 C20orf96Q9NUD7 363 aaPredicted RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 STX18Q9P2W9 335 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 KCNG1Q9UIX4 513 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 CPSF3Q9UKF6 684 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 PRRC2BQ5JSZ5 2229 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 C3orf70A6NLC5 250 aaPredicted RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 RNASEH1O60930 286 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 RFPL1O75677 317 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 BPGMP07738 259 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 CASP2P42575 452 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 GPD2P43304 727 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 CXCR3P49682 368 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 IRF9Q00978 393 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 SH2D4BQ5SQS7 431 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 SATL1Q86VE3 508 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 SNX32Q86XE0 403 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 DIS3LQ8TF46 1054 aaKnown RBP11.89□□□□□ -0.51
SEC23B-204ENST00000377475 CDRT15Q96T59 188 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 GRIP2Q9C0E4 1043 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 NRDE2Q9H7Z3 1164 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 SYBUQ9NX95 663 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 CSADQ9Y600 493 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 RNF103O00237 685 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 PMM2O15305 246 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 TBC1D12O60347 775 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 ITKQ08881 620 aa11.89□□□□□ -0.51
SEC23B-204ENST00000377475 SLC10A2Q12908 348 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms