RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 CSPG4P5Q96PW8 444 aa18.7■□□□□ 0.58
SF1-203ENST00000377387 ZNF670Q9BS34 389 aa18.7■□□□□ 0.58
SF1-203ENST00000377387 FAM49AQ9H0Q0 323 aaPredicted RBP18.7■□□□□ 0.58
SF1-203ENST00000377387 ZNF358Q9NW07 568 aa18.7■□□□□ 0.58
SF1-203ENST00000377387 RPL26L1Q9UNX3 145 aaKnown RBP18.7■□□□□ 0.58
SF1-203ENST00000377387 PCDHA11Q9Y5I1 949 aa18.7■□□□□ 0.58
SF1-203ENST00000377387 TSPAN1O60635 241 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 VAV1P15498 845 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 ARHGAP24Q8N264 748 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 HIPK4Q8NE63 616 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 USP6NLQ92738 828 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 ANKRD27Q96NW4 1050 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 PANX3Q96QZ0 392 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 DDX50Q9BQ39 737 aaKnown RBP18.69■□□□□ 0.58
SF1-203ENST00000377387 VRTNQ9H8Y1 702 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 TAGLN3Q9UI15 199 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 LMO2P25791 158 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 CRHR1P34998 444 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 PEX6Q13608 980 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 ZNF618Q5T7W0 954 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 VWA5B1Q5TIE3 1220 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 SULF1Q8IWU6 871 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 TP53INP2Q8IXH6 220 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 ULK2Q8IYT8 1036 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.69■□□□□ 0.58
SF1-203ENST00000377387 COLGALT1Q8NBJ5 622 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 AGR3Q8TD06 166 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 SH3TC2Q8TF17 1288 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 AGAP3Q96P47 875 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 TBCBQ99426 244 aa18.69■□□□□ 0.58
SF1-203ENST00000377387 CREB3O43889 395 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 SORBS2O94875 1100 aaKnown RBP18.68■□□□□ 0.58
SF1-203ENST00000377387 MLH1P40692 756 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 CCNFP41002 786 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 PITX1P78337 314 aaPredicted RBP18.68■□□□□ 0.58
SF1-203ENST00000377387 RNF220Q5VTB9 566 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 TMEM110Q86TL2 294 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 NME8Q8N427 588 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 TEKT4Q8WW24 435 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 SLC4A5Q9BY07 1137 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 FRMD8Q9BZ67 464 aaPredicted RBP18.68■□□□□ 0.58
SF1-203ENST00000377387 CYP4F11Q9HBI6 524 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 ACSS2Q9NR19 701 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 MTMR10Q9NXD2 777 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 KLK14Q9P0G3 267 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 STX18Q9P2W9 335 aaKnown RBP18.68■□□□□ 0.58
SF1-203ENST00000377387 SLC7A8Q9UHI5 535 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 LOC100653049A0A140TA62 436 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 MAP3K7O43318 606 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 USP12O75317 370 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 CIB2O75838 187 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 KRT34O76011 436 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 UBTFL6P0CB48 400 aaPredicted RBP18.68■□□□□ 0.58
SF1-203ENST00000377387 ERVK-10P10266 1014 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 SKIP12755 728 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 AKAP5P24588 427 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 SLC26A2P50443 739 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 EPHB1P54762 984 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 MRPS35P82673 323 aaKnown RBP18.68■□□□□ 0.58
SF1-203ENST00000377387 MCUQ8NE86 351 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 HTR3CQ8WXA8 447 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 ZNF778Q96MU6 729 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 KRT82Q9NSB4 513 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 PNPOQ9NVS9 261 aa18.68■□□□□ 0.58
SF1-203ENST00000377387 LIN7AO14910 233 aaPredicted RBP18.67■□□□□ 0.58
SF1-203ENST00000377387 MDM4O15151 490 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 GCATO75600 419 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 ALDOAP04075 364 aaKnown RBP18.67■□□□□ 0.58
SF1-203ENST00000377387 GSTCDQ8NEC7 633 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 CCDC124Q96CT7 223 aaKnown RBP18.67■□□□□ 0.58
SF1-203ENST00000377387 MTBPQ96DY7 904 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 EIF2AQ9BY44 585 aaKnown RBP18.67■□□□□ 0.58
SF1-203ENST00000377387 XPNPEP3Q9NQH7 507 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 KIAA1257Q9ULG3 409 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 CYP2C8P10632 490 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 RABGGTBP53611 331 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 PDE1CQ14123 709 aaPredicted RBP18.67■□□□□ 0.58
SF1-203ENST00000377387 PKDCCQ504Y2 493 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 RALGPS1Q5JS13 557 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 NCBP2-AS2Q69YL0 99 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 ATG14Q6ZNE5 492 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 HACE1Q8IYU2 909 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 TFB1MQ8WVM0 346 aaKnown RBP18.67■□□□□ 0.58
SF1-203ENST00000377387 LRRC39Q96DD0 335 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 CCDC106Q9BWC9 280 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 THAP1Q9NVV9 213 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 CITO14578 2027 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 DPYSL4O14531 572 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 SMIM24O75264 130 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 ZMPSTE24O75844 475 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 SLC1A6P48664 564 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 THEMIS2Q5TEJ8 643 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 ARMCX2Q7L311 632 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 CMC1Q7Z7K0 106 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 C10orf107Q8IVU9 208 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 WDR75Q8IWA0 830 aaKnown RBP18.67■□□□□ 0.58
SF1-203ENST00000377387 PIDD1Q9HB75 910 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 EMCNQ9ULC0 261 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 C2CD2Q9Y426 696 aa18.67■□□□□ 0.58
SF1-203ENST00000377387 PAPPA2Q9BXP8 1791 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms