RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SND1Q7KZF4 910 aaKnown RBP eCLIP22.11■■□□□ 1.13
CBWD3-202ENST00000377342 SH3RF2Q8TEC5 729 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 SMARCD2Q92925 531 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 MAGEB5Q9BZ81 275 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 ZWILCHQ9H900 591 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 GPATCH2LQ9NWQ4 482 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 CFAP97Q9P2B7 532 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 DOCK4Q8N1I0 1966 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 SCAMP3O14828 347 aaKnown RBP22.1■■□□□ 1.13
CBWD3-202ENST00000377342 MOCS2O96007 188 aaPredicted RBP22.1■■□□□ 1.13
CBWD3-202ENST00000377342 TCF3P15923 654 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 GBP2P32456 591 aaPredicted RBP22.1■■□□□ 1.13
CBWD3-202ENST00000377342 ADRA1BP35368 520 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 GNG11P61952 73 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 TFF2Q03403 129 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 CA9Q16790 459 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 ATP13A4Q4VNC1 1196 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 KCNT1Q5JUK3 1230 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 MEI1Q5TIA1 1274 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 LRRC38Q5VT99 294 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 NUGGCQ68CJ6 796 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 Q6ZNB5 142 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 POLNQ7Z5Q5 900 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 RNF34Q969K3 372 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 HES6Q96HZ4 224 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 LRRC3BQ96PB8 259 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 TRPV4Q9HBA0 871 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 KLHL11Q9NVR0 708 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 FZD10Q9ULW2 581 aa22.1■■□□□ 1.13
CBWD3-202ENST00000377342 DDX3YO15523 660 aaKnown RBP22.09■■□□□ 1.13
CBWD3-202ENST00000377342 PSTPIP1O43586 416 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 APOEP02649 317 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 RARAP10276 462 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 TNNT1P13805 278 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 CTNNA2P26232 953 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 CORO1AP31146 461 aaKnown RBP22.09■■□□□ 1.13
CBWD3-202ENST00000377342 VIPR2P41587 438 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 ARTNQ5T4W7 220 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 RHOT1Q8IXI2 618 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 ALG3Q92685 438 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 C16orf45Q96MC5 204 aaPredicted RBP22.09■■□□□ 1.13
CBWD3-202ENST00000377342 TLR10Q9BXR5 811 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 TMEM51Q9NW97 253 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 AMFRQ9UKV5 643 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 COL4A3Q01955 1670 aa22.09■■□□□ 1.13
CBWD3-202ENST00000377342 PAGE1O75459 146 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 SLC2A3P11169 496 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 LAMP2P13473 410 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 SP100P23497 879 aaPredicted RBP22.08■■□□□ 1.13
CBWD3-202ENST00000377342 MSNP26038 577 aaKnown RBP22.08■■□□□ 1.13
CBWD3-202ENST00000377342 GGCXP38435 758 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 AIF1P55008 147 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 SMAD2Q15796 467 aaKnown RBP22.08■■□□□ 1.13
CBWD3-202ENST00000377342 HADHQ16836 314 aaKnown RBP22.08■■□□□ 1.13
CBWD3-202ENST00000377342 PIK3R6Q5UE93 754 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 NADSYN1Q6IA69 706 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 DENND1CQ8IV53 801 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 ST13P5Q8NFI4 369 aaPredicted RBP22.08■■□□□ 1.13
CBWD3-202ENST00000377342 TEKT4Q8WW24 435 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 KIF9Q9HAQ2 790 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 AP4E1Q9UPM8 1137 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 SNX10Q9Y5X0 201 aa22.08■■□□□ 1.13
CBWD3-202ENST00000377342 PEX5P50542 639 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 ERMARDQ5T6L9 678 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 DDX42Q86XP3 938 aaKnown RBP eCLIP22.07■■□□□ 1.12
CBWD3-202ENST00000377342 UNC45BQ8IWX7 931 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 PYROXD2Q8N2H3 581 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 TTC16Q8NEE8 873 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 BTN2A3PQ96KV6 586 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.07■■□□□ 1.12
CBWD3-202ENST00000377342 EPS15L1Q9UBC2 864 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 AGO1Q9UL18 857 aaKnown RBP22.07■■□□□ 1.12
CBWD3-202ENST00000377342 PCDHA3Q9Y5H8 950 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 ENC1O14682 589 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 KRT7P08729 469 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 HARS2P49590 506 aaKnown RBP22.07■■□□□ 1.12
CBWD3-202ENST00000377342 ETF1P62495 437 aaKnown RBP22.07■■□□□ 1.12
CBWD3-202ENST00000377342 FAM133BQ5BKY9 247 aaKnown RBP22.07■■□□□ 1.12
CBWD3-202ENST00000377342 DCAF12L1Q5VU92 463 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 HTR3DQ70Z44 454 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 CELF5Q8N6W0 485 aaKnown RBP22.07■■□□□ 1.12
CBWD3-202ENST00000377342 HSPH1Q92598 858 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 HS3ST4Q9Y661 456 aa22.07■■□□□ 1.12
CBWD3-202ENST00000377342 ZFP37Q9Y6Q3 630 aaPredicted RBP22.07■■□□□ 1.12
CBWD3-202ENST00000377342 MIF4GDA9UHW6 222 aaKnown RBP22.06■■□□□ 1.12
CBWD3-202ENST00000377342 FAM72CH0Y354 149 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 ATP1A1P05023 1023 aaKnown RBP22.06■■□□□ 1.12
CBWD3-202ENST00000377342 ARSEP51690 589 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 SEMA3BQ13214 749 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 DPYSL2Q16555 572 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 ARL13BQ3SXY8 428 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 BOLA3Q53S33 107 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 MS4A13Q5J8X5 152 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 EFHC2Q5JST6 749 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 FAM72AQ5TYM5 149 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 TANGO2Q6ICL3 276 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 PTCRAQ6ISU1 281 aaPredicted RBP22.06■■□□□ 1.12
CBWD3-202ENST00000377342 FAM72DQ6L9T8 149 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 OTOP3Q7RTS5 596 aa22.06■■□□□ 1.12
CBWD3-202ENST00000377342 FAM72BQ86X60 149 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms