RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 SOX5P35711 763 aa22.99■■□□□ 1.27
SRM-201ENST00000376957 BYSLQ13895 437 aaKnown RBP22.99■■□□□ 1.27
SRM-201ENST00000376957 NCAPHQ15003 741 aa22.99■■□□□ 1.27
SRM-201ENST00000376957 USP39Q53GS9 565 aaKnown RBP22.99■■□□□ 1.27
SRM-201ENST00000376957 MPP7Q5T2T1 576 aa22.99■■□□□ 1.27
SRM-201ENST00000376957 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.99■■□□□ 1.27
SRM-201ENST00000376957 CHPFQ8IZ52 775 aa22.99■■□□□ 1.27
SRM-201ENST00000376957 RNF34Q969K3 372 aa22.99■■□□□ 1.27
SRM-201ENST00000376957 C18orf8Q96DM3 657 aa22.99■■□□□ 1.27
SRM-201ENST00000376957 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.99■■□□□ 1.27
SRM-201ENST00000376957 RRN3Q9NYV6 651 aa22.99■■□□□ 1.27
SRM-201ENST00000376957 BCCIPQ9P287 314 aaKnown RBP eCLIP22.99■■□□□ 1.27
SRM-201ENST00000376957 GFPT2O94808 682 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 TRUB2O95900 331 aaKnown RBP22.98■■□□□ 1.27
SRM-201ENST00000376957 FYNP06241 537 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 CISD3P0C7P0 127 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 ABCB4P21439 1286 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 CDH5P33151 784 aaPredicted RBP22.98■■□□□ 1.27
SRM-201ENST00000376957 PXNP49023 591 aaPredicted RBP22.98■■□□□ 1.27
SRM-201ENST00000376957 SLC6A3Q01959 620 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 DMWDQ09019 674 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 EIF4HQ15056 248 aaKnown RBP22.98■■□□□ 1.27
SRM-201ENST00000376957 EMC10Q5UCC4 262 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 TAF3Q5VWG9 929 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 ANKS1BQ7Z6G8 1248 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 ATP6V0D2Q8N8Y2 350 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 FAM204AQ9H8W3 233 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 TJP2Q9UDY2 1190 aa22.98■■□□□ 1.27
SRM-201ENST00000376957 GFRA2O00451 464 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 HRO43593 1189 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 TSPAN3O60637 253 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 MESP2Q0VG99 397 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 SYPL2Q5VXT5 272 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 ANO7Q6IWH7 933 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 TRIM72Q6ZMU5 477 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 FAM183BPQ6ZVS7 135 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 SND1Q7KZF4 910 aaKnown RBP eCLIP22.97■■□□□ 1.27
SRM-201ENST00000376957 TAC4Q86UU9 113 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 PGBD3Q8N328 593 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 ADAM32Q8TC27 787 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 BTN2A3PQ96KV6 586 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 STAP1Q9ULZ2 295 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 SIK3Q9Y2K2 1263 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 PAXBP1Q9Y5B6 917 aa22.97■■□□□ 1.27
SRM-201ENST00000376957 ZFHX2Q9C0A1 2572 aaPredicted RBP22.96■■□□□ 1.27
SRM-201ENST00000376957 SYCE3A1L190 88 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 SGK1O00141 431 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 ERBB2P04626 1255 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 HOXB2P14652 356 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 CCR1P32246 355 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 SCNN1AP37088 669 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 KLK7P49862 253 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 CDR2Q01850 454 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 OLFML1Q6UWY5 402 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 SLC26A9Q7LBE3 791 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 NOP9Q86U38 636 aaKnown RBP22.96■■□□□ 1.27
SRM-201ENST00000376957 DEFB106AQ8N104 65 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 HJURPQ8NCD3 748 aaPredicted RBP22.96■■□□□ 1.27
SRM-201ENST00000376957 ZNF397Q8NF99 534 aaPredicted RBP22.96■■□□□ 1.27
SRM-201ENST00000376957 EPS8L1Q8TE68 723 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 FCRL2Q96LA5 508 aaPredicted RBP22.96■■□□□ 1.27
SRM-201ENST00000376957 DDIT4Q9NX09 232 aa22.96■■□□□ 1.27
SRM-201ENST00000376957 TRIM24O15164 1050 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 RHOBTB1O94844 696 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 SERPINC1P01008 464 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 HNRNPLP14866 589 aaKnown RBP eCLIP22.95■■□□□ 1.26
SRM-201ENST00000376957 NOS2P35228 1153 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 STARD3Q14849 445 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 ELF2Q15723 593 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 PTPN20Q4JDL3 420 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 PIK3R6Q5UE93 754 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 RASSF3Q86WH2 238 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 SFTPA1Q8IWL2 248 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 DHX40Q8IX18 779 aaKnown RBP22.95■■□□□ 1.26
SRM-201ENST00000376957 WFIKKN2Q8TEU8 576 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 SLC39A13Q96H72 371 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 SPACA7Q96KW9 195 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 SLC2A13Q96QE2 648 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 CIPCQ9C0C6 399 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 PLA2G4CQ9UP65 541 aa22.95■■□□□ 1.26
SRM-201ENST00000376957 PRRT4C9JH25 899 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 GOLGA6L19H0YKK7 550 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 TBL1XO60907 577 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 GRAP2O75791 330 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 MOCS2O96007 188 aaPredicted RBP22.94■■□□□ 1.26
SRM-201ENST00000376957 F9P00740 461 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 RETP07949 1114 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 MMEP08473 750 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 ATP1A3P13637 1013 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 MATKP42679 507 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 GABRB2P47870 512 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 JAM2P57087 298 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 FAM102AQ5T9C2 384 aaPredicted RBP22.94■■□□□ 1.26
SRM-201ENST00000376957 DDX1Q92499 740 aaKnown RBP22.94■■□□□ 1.26
SRM-201ENST00000376957 LOXL4Q96JB6 756 aa22.94■■□□□ 1.26
SRM-201ENST00000376957 POLR3BQ9NW08 1133 aaPredicted RBP22.94■■□□□ 1.26
SRM-201ENST00000376957 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.94■■□□□ 1.26
SRM-201ENST00000376957 TCRBV21S2A2A0A5A6 115 aa22.93■■□□□ 1.26
SRM-201ENST00000376957 FOXD2O60548 495 aaPredicted RBP22.93■■□□□ 1.26
SRM-201ENST00000376957 DAB1O75553 588 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms