RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 TAF3Q5VWG9 929 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 NUGGCQ68CJ6 796 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 OR6B2Q6IFH4 312 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 RFWD3Q6PCD5 774 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 FAM183BPQ6ZVS7 135 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 BEND5Q7L4P6 421 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 CACNA2D4Q7Z3S7 1137 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 TAC4Q86UU9 113 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 RASSF3Q86WH2 238 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 MDGA1Q8NFP4 955 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 DDX1Q92499 740 aaKnown RBP14.84□□□□□ -0.03
CLCN6-203ENST00000376490 ERLEC1Q96DZ1 483 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 SERPINB11Q96P15 392 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 PDCL3Q9H2J4 239 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 POLMQ9NP87 494 aaPredicted RBP14.84□□□□□ -0.03
CLCN6-203ENST00000376490 NLRC4Q9NPP4 1024 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 GMEB2Q9UKD1 530 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 TLR6Q9Y2C9 796 aa14.84□□□□□ -0.03
CLCN6-203ENST00000376490 SPTBN4Q9H254 2564 aa14.83□□□□□ -0.03
CLCN6-203ENST00000376490 F8VZ95 297 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 TRUB2O95900 331 aaKnown RBP14.83□□□□□ -0.04
CLCN6-203ENST00000376490 RETP07949 1114 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 ATP1A3P13637 1013 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 ZNF18P17022 549 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 TGM1P22735 817 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 HOXD9P28356 352 aaPredicted RBP14.83□□□□□ -0.04
CLCN6-203ENST00000376490 SLC11A2P49281 568 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 SGSHP51688 502 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 SPEM2Q0P670 501 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 SYCP1Q15431 976 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 PTPN20Q4JDL3 420 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 DCAF6Q58WW2 860 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 FAM133BQ5BKY9 247 aaKnown RBP14.83□□□□□ -0.04
CLCN6-203ENST00000376490 EFHC1Q5JVL4 640 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 PIK3R6Q5UE93 754 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 NADSYN1Q6IA69 706 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 SDE2Q6IQ49 451 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 APTXQ7Z2E3 356 aaKnown RBP14.83□□□□□ -0.04
CLCN6-203ENST00000376490 TRMT11Q7Z4G4 463 aaKnown RBP14.83□□□□□ -0.04
CLCN6-203ENST00000376490 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.83□□□□□ -0.04
CLCN6-203ENST00000376490 NOP9Q86U38 636 aaKnown RBP14.83□□□□□ -0.04
CLCN6-203ENST00000376490 CHPFQ8IZ52 775 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 DEFB106AQ8N104 65 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 ANKRD20A12PQ8NF67 263 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 HMGB4Q8WW32 186 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 AZIN2Q96A70 460 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 SLC39A13Q96H72 371 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 PCMTD1Q96MG8 357 aaPredicted RBP14.83□□□□□ -0.04
CLCN6-203ENST00000376490 NOX5Q96PH1 765 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 SLC2A11Q9BYW1 496 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 PARD6AQ9NPB6 346 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 SIK3Q9Y2K2 1263 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 CKAP5Q14008 2032 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 CFAP54Q96N23 3096 aa14.83□□□□□ -0.04
CLCN6-203ENST00000376490 TNRC6BQ9UPQ9 1833 aaKnown RBP14.82□□□□□ -0.04
CLCN6-203ENST00000376490 A0A1W2PQF6 199 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 TCRBV21S2A2A0A5A6 115 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 ALDH1A2O94788 518 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 GFPT2O94808 682 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 MMEP08473 750 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 HOXB2P14652 356 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 SLC6A3Q01959 620 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 UBXN1Q04323 297 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 NNTQ13423 1086 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 USP39Q53GS9 565 aaKnown RBP14.82□□□□□ -0.04
CLCN6-203ENST00000376490 ZC3H12AQ5D1E8 599 aaKnown RBP14.82□□□□□ -0.04
CLCN6-203ENST00000376490 TMEM215Q68D42 235 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 KIAA1211LQ6NV74 962 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 PGBD3Q8N328 593 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 FRMD1Q8N878 549 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 TMEM35BQ8NCS4 154 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 RLN3Q8WXF3 142 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 MYEOVQ96EZ4 313 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 ZC3H10Q96K80 434 aaKnown RBP14.82□□□□□ -0.04
CLCN6-203ENST00000376490 SLC2A13Q96QE2 648 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 TRIM62Q9BVG3 475 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
CLCN6-203ENST00000376490 DUSP15Q9H1R2 295 aaPredicted RBP14.82□□□□□ -0.04
CLCN6-203ENST00000376490 SYNCQ9H7C4 482 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 ELOVL2Q9NXB9 296 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 CACNA2D2Q9NY47 1150 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 BCCIPQ9P287 314 aaKnown RBP eCLIP14.82□□□□□ -0.04
CLCN6-203ENST00000376490 XPO7Q9UIA9 1087 aaKnown RBP14.82□□□□□ -0.04
CLCN6-203ENST00000376490 CEP83Q9Y592 693 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 RAD54BQ9Y620 910 aa14.82□□□□□ -0.04
CLCN6-203ENST00000376490 PI4KAP42356 2102 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 GON4LQ3T8J9 2241 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 SYNJ2BP-COX16A0A087WUM0 186 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 LGALS16A8MUM7 142 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 IRAK2O43187 625 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 TBL1XO60907 577 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 MOCS2O96007 188 aaPredicted RBP14.81□□□□□ -0.04
CLCN6-203ENST00000376490 IGLV3-25P01717 112 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 GLI1P08151 1106 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 GABRG2P18507 467 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 HLA-FP30511 346 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 CDH5P33151 784 aaPredicted RBP14.81□□□□□ -0.04
CLCN6-203ENST00000376490 JAM2P57087 298 aa14.81□□□□□ -0.04
CLCN6-203ENST00000376490 SNX16P57768 344 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms