RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.37
LSM2-208ENST00000375661 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
LSM2-208ENST00000375661 DNAJC17Q9NVM6 304 aaKnown RBP12.77□□□□□ -0.37
LSM2-208ENST00000375661 MARK1Q9P0L2 795 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 WDR35Q9P2L0 1181 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 CHORDC1Q9UHD1 332 aaPredicted RBP12.77□□□□□ -0.37
LSM2-208ENST00000375661 HCN2Q9UL51 889 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 WDFY3Q8IZQ1 3526 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 ZFYVE26Q68DK2 2539 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 A0A1B0GTH6 734 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 NDUFS2O75306 463 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 TPM2P07951 284 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 CD58P19256 250 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 ACO1P21399 889 aaKnown RBP12.76□□□□□ -0.37
LSM2-208ENST00000375661 KLK7P49862 253 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 ZNF132P52740 706 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 NDST1P52848 882 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 TPM4P67936 248 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 FANCCQ00597 558 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 GCNT1Q02742 428 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 GOLGA8FQ08AF8 430 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 GOLGA8DPQ0D2H9 430 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 EGFLAMQ63HQ2 1017 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
LSM2-208ENST00000375661 FAM35AQ86V20 835 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 MIB1Q86YT6 1006 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 NAXDQ8IW45 347 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 RGL4Q8IZJ4 473 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 DEFB119Q8N690 84 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 SCAMP5Q8TAC9 235 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 KCNK16Q96T55 309 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 FBXO44Q9H4M3 255 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 CCSER2Q9H7U1 834 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 CISHQ9NSE2 258 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 HMGXB4Q9UGU5 601 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 AJAP1Q9UKB5 411 aaPredicted RBP12.76□□□□□ -0.37
LSM2-208ENST00000375661 CYP8B1Q9UNU6 501 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 APOBEC2Q9Y235 224 aaKnown RBP12.76□□□□□ -0.37
LSM2-208ENST00000375661 SIK3Q9Y2K2 1263 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 GPSM3Q9Y4H4 160 aa12.76□□□□□ -0.37
LSM2-208ENST00000375661 NPC1O15118 1278 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 SH3BP5O60239 455 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 TLR5O60602 858 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 CILPO75339 1184 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 FTH1P19P0C7X4 201 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 TYRP14679 529 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 TBXAS1P24557 533 aaPredicted RBP12.75□□□□□ -0.37
LSM2-208ENST00000375661 WASP42768 502 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 UBXN1Q04323 297 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 SCAPQ12770 1279 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 ORC1Q13415 861 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 NR1I3Q14994 352 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 E2F5Q15329 346 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 SYCP1Q15431 976 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 KLHDC7AQ5VTJ3 777 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 CCNI2Q6ZMN8 369 aaPredicted RBP12.75□□□□□ -0.37
LSM2-208ENST00000375661 UNC93AQ86WB7 457 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 CRYBG2Q8N1P7 616 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 DMXL2Q8TDJ6 3036 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 DNASE2BQ8WZ79 361 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 MRGPRX1Q96LB2 322 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 ERGIC2Q96RQ1 377 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 MED10Q9BTT4 135 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 BBS2Q9BXC9 721 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 KLF16Q9BXK1 252 aaPredicted RBP12.75□□□□□ -0.37
LSM2-208ENST00000375661 UBE2TQ9NPD8 197 aaPredicted RBP12.75□□□□□ -0.37
LSM2-208ENST00000375661 TLR8Q9NR97 1041 aaKnown RBP12.75□□□□□ -0.37
LSM2-208ENST00000375661 GMIPQ9P107 970 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 KIAA1522Q9P206 1035 aaPredicted RBP12.75□□□□□ -0.37
LSM2-208ENST00000375661 APEX2Q9UBZ4 518 aa12.75□□□□□ -0.37
LSM2-208ENST00000375661 LSM7Q9UK45 103 aaKnown RBP12.75□□□□□ -0.37
LSM2-208ENST00000375661 CKAP5Q14008 2032 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 A0A1B0GTW7 788 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 NEDD8-MDP1E9PL57 170 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 TRIM24O15164 1050 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 GREM1O60565 184 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 SERPINC1P01008 464 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 ZNF883P0CG24 379 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 CD6P30203 668 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 DGKGP49619 791 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 PAQR9Q6ZVX9 377 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 ACOT1Q86TX2 421 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 SLC4A11Q8NBS3 891 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 CADM4Q8NFZ8 388 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 OR2I1PQ8NGU4 316 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 CAMK1GQ96NX5 476 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 ACOX2Q99424 681 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 GANQ9H2C0 597 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 CCDC86Q9H6F5 360 aaKnown RBP12.74□□□□□ -0.37
LSM2-208ENST00000375661 CSNK1G1Q9HCP0 422 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 PLCB1Q9NQ66 1216 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 CYLDQ9NQC7 956 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 DNAJC12Q9UKB3 198 aa12.74□□□□□ -0.37
LSM2-208ENST00000375661 PRRT4C9JH25 899 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 RNF225M0QZC1 329 aaPredicted RBP12.73□□□□□ -0.37
LSM2-208ENST00000375661 EPHB6O15197 1021 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 AP1G2O75843 785 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms