RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 SPEM1Q8N4L4 309 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 PRICKLE1Q96MT3 831 aaPredicted RBP16.61■□□□□ 0.25
C11orf88-202ENST00000375618 PRRX2Q99811 253 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 TRIM62Q9BVG3 475 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 RAB6CQ9H0N0 254 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 NUCKS1Q9H1E3 243 aaKnown RBP16.61■□□□□ 0.25
C11orf88-202ENST00000375618 RBSNQ9H1K0 784 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 HAUS4Q9H6D7 363 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 FAM204AQ9H8W3 233 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 DDIT4Q9NX09 232 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 COX16Q9P0S2 106 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 FBXO10Q9UK96 956 aa16.61■□□□□ 0.25
C11orf88-202ENST00000375618 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
C11orf88-202ENST00000375618 A0A1W2PQJ5 194 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 TCRBV5S1A1TA0A578 114 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 PRRT4C9JH25 899 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 I6L893 689 aaPredicted RBP16.6■□□□□ 0.25
C11orf88-202ENST00000375618 K7ESF4 209 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 DDX3XO00571 662 aaKnown RBP eCLIP16.6■□□□□ 0.25
C11orf88-202ENST00000375618 LAMTOR5O43504 91 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 LATS1O95835 1130 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 MOCS2O96007 188 aaPredicted RBP16.6■□□□□ 0.25
C11orf88-202ENST00000375618 NOS2P35228 1153 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 CHKAP35790 457 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 MATKP42679 507 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 ATXN1P54253 815 aaKnown RBP16.6■□□□□ 0.25
C11orf88-202ENST00000375618 CDK17Q00537 523 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 DMWDQ09019 674 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 ADGRF1Q5T601 910 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 NUGGCQ68CJ6 796 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 HGSNATQ68CP4 663 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 PHF13Q86YI8 300 aaPredicted RBP16.6■□□□□ 0.25
C11orf88-202ENST00000375618 SYNPOQ8N3V7 929 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 EMC1Q8N766 993 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 RPLP0P6Q8NHW5 317 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 JOSD2Q8TAC2 188 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 USP33Q8TEY7 942 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 CPLX3Q8WVH0 158 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 NT5C3BQ969T7 300 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 METTL5Q9NRN9 209 aaKnown RBP16.6■□□□□ 0.25
C11orf88-202ENST00000375618 PIGVQ9NUD9 493 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 SEPT11Q9NVA2 429 aaKnown RBP16.6■□□□□ 0.25
C11orf88-202ENST00000375618 WDR35Q9P2L0 1181 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 DEC1Q9P2X7 70 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 CAPN11Q9UMQ6 739 aa16.6■□□□□ 0.25
C11orf88-202ENST00000375618 ATG2BQ96BY7 2078 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 KCNU1A8MYU2 1149 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 M0QYT0 321 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 APODP05090 189 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 HOXD9P28356 352 aaPredicted RBP16.59■□□□□ 0.25
C11orf88-202ENST00000375618 GRIA2P42262 883 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 KIR2DL1P43626 348 aaPredicted RBP16.59■□□□□ 0.25
C11orf88-202ENST00000375618 SNX16P57768 344 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 CSTF1Q05048 431 aaKnown RBP16.59■□□□□ 0.25
C11orf88-202ENST00000375618 NME3Q13232 169 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 PIK3R6Q5UE93 754 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 GRAMD4Q6IC98 578 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 BNIPLQ7Z465 357 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 UNC45BQ8IWX7 931 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 TERB1Q8NA31 727 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 WFDC5Q8TCV5 224 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 AZIN2Q96A70 460 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 CFAP57Q96MR6 1250 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 TBCBQ99426 244 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 IER2Q9BTL4 223 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 NUP58Q9BVL2 599 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.59■□□□□ 0.25
C11orf88-202ENST00000375618 ITIH6Q6UXX5 1313 aa16.59■□□□□ 0.25
C11orf88-202ENST00000375618 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.58■□□□□ 0.24
C11orf88-202ENST00000375618 CHURC1-FNTBB4DL54 471 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 PLEKP08567 350 aaPredicted RBP16.58■□□□□ 0.24
C11orf88-202ENST00000375618 HNRNPLP14866 589 aaKnown RBP eCLIP16.58■□□□□ 0.24
C11orf88-202ENST00000375618 TNFAIP3P21580 790 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 NSFP46459 744 aaKnown RBP16.58■□□□□ 0.24
C11orf88-202ENST00000375618 CXCL12P48061 93 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 SULT1E1P49888 294 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 KLHL30Q0D2K2 578 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 GEN1Q17RS7 908 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 FBXO43Q4G163 708 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 C2orf27AQ580R0 203 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 C10orf76Q5T2E6 689 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 RNF43Q68DV7 783 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 ACAD10Q6JQN1 1059 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 CCDC33Q8N5R6 958 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 DDI1Q8WTU0 396 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 NELL1Q92832 810 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 PRMT1Q99873 361 aaKnown RBP16.58■□□□□ 0.24
C11orf88-202ENST00000375618 TMPRSS4Q9NRS4 437 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 ADAM22Q9P0K1 906 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 FBXO4Q9UKT5 387 aa16.58■□□□□ 0.24
C11orf88-202ENST00000375618 TBC1D3BA6NDS4 549 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 TMCO5BA8MYB1 307 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 CCDC172P0C7W6 258 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 CASP14P31944 242 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 TIE1P35590 1138 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 GGCXP38435 758 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 SLC11A2P49281 568 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 DGKGP49619 791 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 IRAK1P51617 712 aa16.57■□□□□ 0.24
C11orf88-202ENST00000375618 CCR3P51677 355 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms