RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 NCANO14594 1321 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 PPP1R2P1Q96PQ5 205 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 RNF157Q96PX1 679 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 CASS4Q9NQ75 786 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 CDH9Q9ULB4 789 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 PHTF1Q9UMS5 762 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 TMEM191CA6NGB0 347 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 AIM2O14862 343 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 SKAP2O75563 359 aaPredicted RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 DGKIO75912 1065 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 VAPBO95292 243 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 ERBB2P04626 1255 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 TUFMP49411 452 aaKnown RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 FAM83EQ2M2I3 478 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 ANKRD20A8PQ5CZ79 823 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 MFN1Q8IWA4 741 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 TFAP2BQ92481 460 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 ERLEC1Q96DZ1 483 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 LGMNQ99538 433 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 MINDY3Q9H8M7 445 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 PCDHB8Q9UN66 801 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 PCDHA2Q9Y5H9 948 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 NCF1BA6NI72 391 aaPredicted RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 NCF1CA8MVU1 366 aaPredicted RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 MAP3K7O43318 606 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 NCF1P14598 390 aaPredicted RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 RENBPP51606 427 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 PKN2Q16513 984 aaKnown RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 FBXW10Q5XX13 1052 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 RGS9BPQ6ZS82 235 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 ATAD1Q8NBU5 361 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 TCRBV7S2A1N4TA0A589 114 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 C22orf31O95567 290 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 SERPINF2P08697 491 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 RPL22P35268 128 aaKnown RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 LAMB3Q13751 1172 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 UNC45BQ8IWX7 931 aa18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 TMA16Q96EY4 203 aaKnown RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 RUVBL2Q9Y230 463 aaKnown RBP18.46■□□□□ 0.55
PTPDC1-202ENST00000375360 ZNF197O14709 1029 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 BANF1O75531 89 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 SYTL3Q4VX76 610 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 CCNJLQ8IV13 435 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 ZCWPW1Q9H0M4 648 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 EML4Q9HC35 981 aaKnown RBP18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 ERVK-5Q9HDB9 667 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 VCX3AQ9NNX9 186 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 NSMCE4AQ9NXX6 385 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 KIAA0100Q14667 2235 aaKnown RBP18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 BUD23O43709 281 aaKnown RBP18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 SRP72O76094 671 aaKnown RBP18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 MAP4P27816 1152 aaKnown RBP18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 PCBP1Q15365 356 aaKnown RBP eCLIP18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 RAP1GAP2Q684P5 730 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 ABCC13Q9NSE7 274 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 CACNG4Q9UBN1 327 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 SFMBT1Q9UHJ3 866 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 GIT1Q9Y2X7 761 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 B2RBV5 119 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 ARHGAP1Q07960 439 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 TUSC3Q13454 348 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 LAYNQ6UX15 382 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 ZNF662Q6ZS27 426 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 TPGS1Q6ZTW0 290 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 SRLQ86TD4 932 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 FAM35AQ86V20 835 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 RFWD2Q8NHY2 731 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 SCUBE2Q9NQ36 999 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 SPEF2Q9C093 1822 aa18.45■□□□□ 0.54
PTPDC1-202ENST00000375360 A8MX80 341 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 LIASO43766 372 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 SHBGP04278 402 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 ERCC2P18074 760 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 MGAT5Q09328 741 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 PDCD2Q16342 344 aaPredicted RBP18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 ADCK2Q7Z695 626 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 THTPAQ9BU02 230 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 ANGPTL2Q9UKU9 493 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 TRDMT1O14717 391 aaKnown RBP18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 CILPO75339 1184 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 MT-CO1P00395 513 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 STMN1P16949 149 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 RGS4P49798 205 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 CACUL1Q86Y37 369 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 LPCAT1Q8NF37 534 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 NRDE2Q9H7Z3 1164 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 R3HDM2Q9Y2K5 976 aaKnown RBP18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 CCT8L1PA6NM43 557 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 CFAP99D6REC4 459 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 SERPIND1P05546 499 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 NR2C2P49116 596 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 CSHL1Q14406 222 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 LRRC38Q5VT99 294 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 TRMT13Q9NUP7 481 aaKnown RBP18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 TCN1P20061 433 aaPredicted RBP18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 PSMB4P28070 264 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 CLCNKBP51801 687 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 RABGGTBP53611 331 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms