RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 KRT37O76014 449 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 RB1P06400 928 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 RHOQP17081 205 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 CCNA2P20248 432 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 SNAPC2Q13487 334 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 NONOQ15233 471 aaKnown RBP eCLIP9.33□□□□□ -0.92
UBR4-201ENST00000375218 KCNA10Q16322 511 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 PGBD2Q6P3X8 592 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 CLEC17AQ6ZS10 378 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 MIER3Q7Z3K6 550 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 BRAPQ7Z569 592 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 CPLX4Q7Z7G2 160 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 AACSQ86V21 672 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 ZSCAN18Q8TBC5 510 aaPredicted RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 PPP1R14AQ96A00 147 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 SYTL4Q96C24 671 aaPredicted RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 SNF8Q96H20 258 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 GON7Q9BXV9 100 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 PITHD1Q9GZP4 211 aaPredicted RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 IGFLR1Q9H665 355 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 NPHS2Q9NP85 383 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 POLE3Q9NRF9 147 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 DECR2Q9NUI1 292 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 OR6C2Q9NZP2 312 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 VANGL2Q9ULK5 521 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 CIAO1O76071 339 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 ALDH1A1P00352 501 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 LUMP51884 338 aaPredicted RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 KLC1Q07866 573 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 CYP27C1Q4G0S4 372 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 C15orf52Q6ZUT6 534 aaKnown RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 GAS2L3Q86XJ1 694 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 ZNF669Q96BR6 464 aaPredicted RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 LRRC39Q96DD0 335 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 NTMT1Q9BV86 223 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 OSGEPL1Q9H4B0 414 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 WWOXQ9NZC7 414 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 GMIPQ9P107 970 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 C5AR2Q9P296 337 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 ZHX2Q9Y6X8 837 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 SALL1Q9NSC2 1324 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 MACROD2A1Z1Q3 448 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 RCCD1A6NED2 376 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 LGALS16A8MUM7 142 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PTGES3LE9PB15 166 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 H0YIV9 168 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 FZD9O00144 591 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PHF2O75151 1096 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PPP6R2O75170 966 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PDE5AO76074 875 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 KLHL18O94889 574 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 TUBB4AP04350 444 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 TECP42680 631 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PRELPP51888 382 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 ROR2Q01974 943 aaKnown RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 SNX30Q5VWJ9 437 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 CASC4Q6P4E1 433 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 KLHDC10Q6PID8 442 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 CWC27Q6UX04 472 aaKnown RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 LPCAT1Q8NF37 534 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 CCDC12Q8WUD4 166 aaPredicted RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 SECISBP2Q96T21 854 aaKnown RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 AGXT2Q9BYV1 514 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 NRIP3Q9NQ35 241 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 TBC1D23Q9NUY8 699 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 DOLKQ9UPQ8 538 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 DERAQ9Y315 318 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 RLFQ13129 1914 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 GOLGA8KD6RF30 607 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 HNRNPA1P09651 372 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBR4-201ENST00000375218 KRT5P13647 590 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 SELLP14151 372 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 CHMP24386 653 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 LSP1P33241 339 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 XIAPP98170 497 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 ELP6Q0PNE2 266 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 CRY2Q49AN0 593 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 ATXN7L2Q5T6C5 722 aaPredicted RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 CACHD1Q5VU97 1274 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 MACC1Q6ZN28 852 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 CYP2U1Q7Z449 544 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 TPRA1Q86W33 373 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 WASF1Q92558 559 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 RBM4BQ9BQ04 359 aaKnown RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 RBM4Q9BWF3 364 aaKnown RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 MOV10L1Q9BXT6 1211 aaKnown RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 NUF2Q9BZD4 464 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 SLITRK6Q9H5Y7 841 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PREBQ9HCU5 417 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PNPLA7Q6ZV29 1317 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 TRBV23OR9-2A0A075B6M9 112 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 TRAV34A0A0B4J273 112 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 ZBED1O96006 694 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PRKAR1AP10644 381 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 HNRNPLP14866 589 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBR4-201ENST00000375218 BTKQ06187 659 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 USP10Q14694 798 aaKnown RBP9.32□□□□□ -0.92
UBR4-201ENST00000375218 DPYSL2Q16555 572 aa9.32□□□□□ -0.92
UBR4-201ENST00000375218 PFKFB4Q16877 469 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms