RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 DTNBP1Q96EV8 351 aa11.45□□□□□ -0.58
CCDC40-203ENST00000374877 PEBP4Q96S96 227 aa11.45□□□□□ -0.58
CCDC40-203ENST00000374877 KLC2Q9H0B6 622 aa11.45□□□□□ -0.58
CCDC40-203ENST00000374877 RAB6CQ9H0N0 254 aa11.45□□□□□ -0.58
CCDC40-203ENST00000374877 CLIC5Q9NZA1 410 aa11.45□□□□□ -0.58
CCDC40-203ENST00000374877 SLC4A7Q9Y6M7 1214 aa11.45□□□□□ -0.58
CCDC40-203ENST00000374877 IGKV6D-21A0A0A0MT36 114 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 OR6B1O95007 311 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 PGM3O95394 542 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 SPATA31D3P0C874 917 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 VCLP18206 1134 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 KCNA4P22459 653 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 CCNFP41002 786 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 GRIA2P42262 883 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 MSLNQ13421 630 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 KRT81Q14533 505 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 DUOXA2Q1HG44 320 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 MORN1Q5T089 497 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 FAM102AQ5T9C2 384 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 SPATA31D4Q6ZUB0 917 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 CAND1Q86VP6 1230 aaKnown RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 SPATA24Q86W54 205 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 XYLT1Q86Y38 959 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 PIWIL2Q8TC59 973 aaKnown RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 PIGRP01833 764 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 RAG1P15918 1043 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 NCF2P19878 526 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 PRKCHP24723 683 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 CRHR1P34998 444 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 CDH8P55286 799 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 NOGQ13253 232 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 CCNIQ14094 377 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 HNRNPDQ14103 355 aaKnown RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 TFDP2Q14188 446 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 SCYL2Q6P3W7 929 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 NCSTNQ92542 709 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 ADPGKQ9BRR6 497 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 GPATCH2LQ9NWQ4 482 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 TRDMT1O14717 391 aaKnown RBP11.44□□□□□ -0.58
CCDC40-203ENST00000374877 CA12O43570 354 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 HOXC6P09630 235 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 LSAMPQ13449 338 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 TTLL4Q14679 1199 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 PDK3Q15120 406 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 ADGRF2Q8IZF7 708 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 DEFB107AQ8IZN7 70 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 PLAC1Q9HBJ0 212 aa11.44□□□□□ -0.58
CCDC40-203ENST00000374877 CCDC160A6NGH7 325 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 SIN3BO75182 1162 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 GRAP2O75791 330 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ZMPSTE24O75844 475 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 KLHL2O95198 593 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 PABPC4LP0CB38 370 aaKnown RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 VAV1P15498 845 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 C15orf59Q2T9L4 293 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 CELF3Q5SZQ8 465 aaKnown RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ADGRG6Q86SQ4 1221 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 DPP9Q86TI2 863 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 HPS6Q86YV9 775 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 MPP5Q8N3R9 675 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 HIC2Q96JB3 615 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 MAML3Q96JK9 1138 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ZNF778Q96MU6 729 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 HAPLN3Q96S86 360 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 USP29Q9HBJ7 922 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ETNK2Q9NVF9 386 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ASNSD1Q9NWL6 643 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 CDH22Q9UJ99 828 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 MAFBQ9Y5Q3 323 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 HMX2A2RU54 273 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 BIRC5O15392 142 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 MED7O43513 233 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ASPAP45381 313 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 SLC1A6P48664 564 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 AP3M2P53677 418 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 MAP7Q14244 749 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ARCQ7LC44 396 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 CCDC33Q8N5R6 958 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 GCNAQ96QF7 691 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 IFT122Q9HBG6 1241 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ZDHHC7Q9NXF8 308 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 SLC17A6Q9P2U8 582 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 F5H423 210 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 PRPSAP2O60256 369 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 OATP04181 439 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ATP5BP06576 529 aaKnown RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 BCAR1P56945 870 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 TBC1D25Q3MII6 688 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 N4BP2L1Q5TBK1 243 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 VWA5B1Q5TIE3 1220 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 FAM160B1Q5W0V3 765 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 CASC4Q6P4E1 433 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 FBXO16Q8IX29 292 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ICA1LQ8NDH6 482 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms