RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 NAALADL1Q9UQQ1 740 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 PRG3Q9Y2Y8 225 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 PLIN4Q96Q06 1357 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 STX7O15400 261 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 EIF2S1P05198 315 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 FAM200BP0CF97 657 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 CAPZA2P47755 286 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 OR1G1P47890 313 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 PLIN5Q00G26 463 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 TMEM132BQ14DG7 1078 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 NUDT18Q6ZVK8 323 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 CASZ1Q86V15 1759 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 RMND5BQ96G75 393 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 CRLS1Q9UJA2 301 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 NID2Q14112 1375 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 ACKR2O00590 384 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 KPNA4O00629 521 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 RIPK2O43353 540 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 GLRBP48167 497 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 TBCELQ5QJ74 424 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 ARHGAP22Q7Z5H3 698 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 DDX53Q86TM3 631 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 POP1Q99575 1024 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 KLK14Q9P0G3 267 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 BTBD7Q9P203 1132 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 PCDHB7Q9Y5E2 793 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 BAZ2AQ9UIF9 1905 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 STRCP1A6NGW2 1772 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 KRT20P35900 424 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 CNTN1Q12860 1018 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 C11orf74Q86VG3 221 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 ZNF410Q86VK4 478 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 CHSY1Q86X52 802 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 ETNPPLQ8TBG4 499 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 VPS33AQ96AX1 596 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 NMRK1Q9NWW6 199 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 ARHGAP20Q9P2F6 1191 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 ZNF862O60290 1169 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 RBP1P09455 135 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 FASP25445 335 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 GDPD5Q8WTR4 605 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 MIEF2Q96C03 454 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 SEMA4AQ9H3S1 761 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 ADAM30Q9UKF2 790 aa12.59□□□□□ -0.39
NPLOC4-202ENST00000374747 MYH7P12883 1935 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 VPS26AO75436 327 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 PPIDQ08752 370 aaKnown RBP12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 ATP1A4Q13733 1029 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 PKN2Q16513 984 aaKnown RBP12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 IL17AQ16552 155 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 GLRA4Q5JXX5 417 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 RSBN1Q5VWQ0 802 aaPredicted RBP12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 SPOCD1Q6ZMY3 1216 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 BNIPLQ7Z465 357 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 HOMEZQ8IX15 550 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 HS6ST3Q8IZP7 471 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 KRT78Q8N1N4 520 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 ZCCHC7Q8N3Z6 543 aaKnown RBP12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 SLC35C1Q96A29 364 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 MAGED4Q96JG8 741 aa12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 IARS2Q9NSE4 1012 aaKnown RBP12.58□□□□□ -0.39
NPLOC4-202ENST00000374747 KLRG2A4D1S0 409 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 LRRC10BA6NIK2 292 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 PROSCO94903 275 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 NME5P56597 212 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 RPL10AP62906 217 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 TRAF2Q12933 501 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 BFSP2Q13515 415 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ARMC4Q5T2S8 1044 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 IRGCQ6NXR0 463 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 STRA8Q7Z7C7 330 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 C19orf18Q8NEA5 215 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 CPB2Q96IY4 423 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ZNF512Q96ME7 567 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 MAF1Q9H063 256 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 TAF1P21675 1872 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 M0QYT0 321 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ANXA11P50995 505 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 C16orf72Q14CZ0 275 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 STKLD1Q8NE28 680 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 TMEM121Q9BTD3 319 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 PNMA8BQ9ULN7 279 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ACOT9Q9Y305 439 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 RAD54BQ9Y620 910 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 C2orf81A6NN90 581 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ASNA1O43681 348 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 TSC22D2O75157 780 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 LSM8O95777 96 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ALOX15P16050 662 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 NCKAP1LP55160 1127 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 KCNT1Q5JUK3 1230 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 CCDC149Q6ZUS6 474 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ZNF571Q7Z3V5 609 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms