RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 ACSF2Q96CM8 615 aaPredicted RBP18.21■□□□□ 0.51
PFDN6-201ENST00000374606 HES6Q96HZ4 224 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 TLR10Q9BXR5 811 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 ADAM33Q9BZ11 813 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 HCFC1R1Q9NWW0 138 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 USP18Q9UMW8 372 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.21■□□□□ 0.51
PFDN6-201ENST00000374606 ANAPC1Q9H1A4 1944 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 EP300Q09472 2414 aaPredicted RBP18.2■□□□□ 0.5
PFDN6-201ENST00000374606 DENND4CQ5VZ89 1909 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 FANCGO15287 622 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 ENDOD1O94919 500 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 IGLV3-25P01717 112 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 RHOP08100 348 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 TCF4P15884 667 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 CYP4F8P98187 520 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 SLC25A11Q02978 314 aaKnown RBP18.2■□□□□ 0.5
PFDN6-201ENST00000374606 RAB6CQ53S08 254 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 LRRC38Q5VT99 294 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 TMC5Q6UXY8 1006 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 GAREM2Q75VX8 874 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 FAM131BQ86XD5 332 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 KIF18AQ8NI77 898 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 RAB6CQ9H0N0 254 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 ATXN3LQ9H3M9 355 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 ZWILCHQ9H900 591 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 TRPC7Q9HCX4 862 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 PIGVQ9NUD9 493 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 TMEM51Q9NW97 253 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.2■□□□□ 0.5
PFDN6-201ENST00000374606 MARCH2Q9P0N8 246 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 CALCOCO1Q9P1Z2 691 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 DNMT3BQ9UBC3 853 aaKnown RBP18.2■□□□□ 0.5
PFDN6-201ENST00000374606 PCSK1NQ9UHG2 260 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 SFMBT1Q9UHJ3 866 aa18.2■□□□□ 0.5
PFDN6-201ENST00000374606 A0A1W2PRU2 124 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 MDM4O15151 490 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 MSI1O43347 362 aaKnown RBP18.19■□□□□ 0.5
PFDN6-201ENST00000374606 PAPLNO95428 1278 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 OAS1P00973 400 aaKnown RBP18.19■□□□□ 0.5
PFDN6-201ENST00000374606 KRT7P08729 469 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 ATP5C1P36542 298 aaKnown RBP18.19■□□□□ 0.5
PFDN6-201ENST00000374606 MARCKSL1P49006 195 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 ATXN1P54253 815 aaKnown RBP18.19■□□□□ 0.5
PFDN6-201ENST00000374606 NNTQ13423 1086 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 TDGQ13569 410 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 ANGPT1Q15389 498 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 KLHDC10Q6PID8 442 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 OTOP3Q7RTS5 596 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 POLNQ7Z5Q5 900 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 GRASPQ7Z6J2 395 aaPredicted RBP18.19■□□□□ 0.5
PFDN6-201ENST00000374606 KRT35Q92764 455 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 PEBP4Q96S96 227 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 DNMT3LQ9UJW3 386 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 FBXL21Q9UKT6 434 aa18.19■□□□□ 0.5
PFDN6-201ENST00000374606 C2orf78A6NCI8 922 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 DDX3YO15523 660 aaKnown RBP18.18■□□□□ 0.5
PFDN6-201ENST00000374606 COCHO43405 550 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 PI15O43692 258 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 TBX18O95935 607 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 SMTNL2Q2TAL5 461 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 ARHGAP15Q53QZ3 475 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 ZFYVE27Q5T4F4 411 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 MIB1Q86YT6 1006 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 DTWD2Q8NBA8 298 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 SHKBP1Q8TBC3 707 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 RNF34Q969K3 372 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 PSMB7Q99436 277 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 WDR6Q9NNW5 1121 aaKnown RBP18.18■□□□□ 0.5
PFDN6-201ENST00000374606 DDX56Q9NY93 547 aaKnown RBP18.18■□□□□ 0.5
PFDN6-201ENST00000374606 SNX12Q9UMY4 172 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 DUSP12Q9UNI6 340 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 TLR6Q9Y2C9 796 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 PCDHA3Q9Y5H8 950 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 C2orf16Q68DN1 1984 aa18.18■□□□□ 0.5
PFDN6-201ENST00000374606 SLC12A8A0AV02 714 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 KCNK3O14649 394 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 ZNF197O14709 1029 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 KRT1P04264 644 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 GJA1P17302 382 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 TCP1P17987 556 aaKnown RBP18.17■□□□□ 0.5
PFDN6-201ENST00000374606 IL1R2P27930 398 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 CCR2P41597 374 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 CXCR3P49682 368 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 KPNA1P52294 538 aaPredicted RBP18.17■□□□□ 0.5
PFDN6-201ENST00000374606 AIF1P55008 147 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 RWDD2BP57060 319 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 TBX4P57082 545 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 NTHL1P78549 312 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 TRIP4Q15650 581 aaPredicted RBP18.17■□□□□ 0.5
PFDN6-201ENST00000374606 ARL13BQ3SXY8 428 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 ODF2Q5BJF6 829 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 BRMS1LQ5PSV4 323 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 PAPD7Q5XG87 772 aaKnown RBP18.17■□□□□ 0.5
PFDN6-201ENST00000374606 TXNDC8Q6A555 127 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 TXNRD3NBQ6F5E7 133 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 GPR149Q86SP6 731 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 KATNAL2Q8IYT4 538 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 SIX5Q8N196 739 aa18.17■□□□□ 0.5
PFDN6-201ENST00000374606 CCDC185Q8N715 623 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms