RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 BBOF1Q8ND07 529 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 AFG1LQ8WV93 481 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 LENG1Q96BZ8 264 aaPredicted RBP6.62□□□□□ -1.35
CHD6-202ENST00000373222 CFAP36Q96G28 342 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 SERINC2Q96SA4 455 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 MMP19Q99542 508 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 CCDC77Q9BR77 488 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 CEP41Q9BYV8 373 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 RXFP1Q9HBX9 757 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 IL1RAPL1Q9NZN1 696 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 PSMC3IPQ9P2W1 217 aaPredicted RBP6.62□□□□□ -1.35
CHD6-202ENST00000373222 NKX1-2Q9UD57 310 aaPredicted RBP6.62□□□□□ -1.35
CHD6-202ENST00000373222 TUBGCP4Q9UGJ1 667 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 SHOC2Q9UQ13 582 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 DNAJC25-GNG10A0A024R161 153 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 VSTM5A8MXK1 200 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 UPP2O95045 317 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 RBL1P28749 1068 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 CRADDP78560 199 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 PURAQ00577 322 aaKnown RBP6.62□□□□□ -1.35
CHD6-202ENST00000373222 LMNB2Q03252 620 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 ARHGAP1Q07960 439 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 FAAP100Q0VG06 881 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 BMPR2Q13873 1038 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 SETDB1Q15047 1291 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 CCDC14Q49A88 953 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 C1orf53Q5VUE5 145 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 DARS2Q6PI48 645 aaKnown RBP6.62□□□□□ -1.35
CHD6-202ENST00000373222 MAMDC4Q6UXC1 1216 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 CCDC81Q6ZN84 652 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 ARMCX2Q7L311 632 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 TTC7BQ86TV6 843 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 GPC2Q8N158 579 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 PYROXD2Q8N2H3 581 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 MPP5Q8N3R9 675 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 PLD5Q8N7P1 536 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 CMASQ8NFW8 434 aaPredicted RBP6.62□□□□□ -1.35
CHD6-202ENST00000373222 CCDC110Q8TBZ0 833 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 ADAM32Q8TC27 787 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 C10orf82Q8WW14 230 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 ZNF75CPQ92670 426 aaPredicted RBP6.62□□□□□ -1.35
CHD6-202ENST00000373222 KCNN1Q92952 543 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 MCRS1Q96EZ8 462 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 FAM111AQ96PZ2 611 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 GOLGA2P5Q9HBQ8 144 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 FBXO6Q9NRD1 293 aaPredicted RBP6.62□□□□□ -1.35
CHD6-202ENST00000373222 SMYD2Q9NRG4 433 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 KLHL14Q9P2G3 628 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 TNFSF13BQ9Y275 285 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 PLXNB2O15031 1838 aa6.62□□□□□ -1.35
CHD6-202ENST00000373222 C2CD4BA6NLJ0 364 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 H7C0C1 242 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 APOC4-APOC2K7ER74 178 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 CYB561D2O14569 222 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 KCNN4O15554 427 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 PRPF4O43172 522 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHD6-202ENST00000373222 EDF1O60869 148 aaKnown RBP6.61□□□□□ -1.35
CHD6-202ENST00000373222 TNFRSF21O75509 655 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 APOC2P02655 101 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 GSTA1P08263 222 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 EPHB2P29323 1055 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 MSH2P43246 934 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 ATP5OP48047 213 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 YWHAGP61981 247 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHD6-202ENST00000373222 PITX1P78337 314 aaPredicted RBP6.61□□□□□ -1.35
CHD6-202ENST00000373222 GBE1Q04446 702 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 SLC10A2Q12908 348 aaPredicted RBP6.61□□□□□ -1.35
CHD6-202ENST00000373222 OLIG2Q13516 323 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 SPARCL1Q14515 664 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 TAZQ16635 292 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 PDK4Q16654 411 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 GOLGA7BQ2TAP0 167 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 GFOD2Q3B7J2 385 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 PREPLQ4J6C6 727 aaPredicted RBP6.61□□□□□ -1.35
CHD6-202ENST00000373222 HHATQ5VTY9 493 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 SPRYD7Q5W111 196 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 TRMT10BQ6PF06 316 aaKnown RBP6.61□□□□□ -1.35
CHD6-202ENST00000373222 PPP1R21Q6ZMI0 780 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 PLPPR4Q7Z2D5 763 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 POLNQ7Z5Q5 900 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 MTDHQ86UE4 582 aaKnown RBP6.61□□□□□ -1.35
CHD6-202ENST00000373222 TP53INP2Q8IXH6 220 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 PALM2Q8IXS6 379 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 PQLC3Q8N755 202 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 PCDH19Q8TAB3 1148 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 P3H4Q92791 437 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 NINJ1Q92982 152 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 OPTNQ96CV9 577 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 FAM167AQ96KS9 214 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 CENPOQ9BU64 300 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 APOL6Q9BWW8 343 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 EIF2AQ9BY44 585 aaKnown RBP6.61□□□□□ -1.35
CHD6-202ENST00000373222 ZNF518BQ9C0D4 1074 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 FAM49AQ9H0Q0 323 aaPredicted RBP6.61□□□□□ -1.35
CHD6-202ENST00000373222 LHX5Q9H2C1 402 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 ACSS3Q9H6R3 686 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 USP29Q9HBJ7 922 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 ARHGEF3Q9NR81 526 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 RAB6BQ9NRW1 208 aa6.61□□□□□ -1.35
CHD6-202ENST00000373222 ETNK2Q9NVF9 386 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms