RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 PSMD5Q16401 504 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 ARL13BQ3SXY8 428 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 SLC8B1Q6J4K2 584 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 FAM117BQ6P1L5 589 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 MON1AQ86VX9 555 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 SLC39A11Q8N1S5 342 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 TMEM199Q8N511 208 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 FBXO22Q8NEZ5 403 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 GPR152Q8TDT2 470 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 LRRN4Q8WUT4 740 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 CPT1BQ92523 772 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 SPATA17Q96L03 361 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 TMBIM4Q9HC24 238 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 LRRC4CQ9HCJ2 640 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 DNAJC17Q9NVM6 304 aaKnown RBP18.14■□□□□ 0.49
SSBP3-203ENST00000371319 GMIPQ9P107 970 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 SHOC2Q9UQ13 582 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 CDY1Q9Y6F8 540 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 KCNN4O15554 427 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 EFCAB14O75071 495 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 SHBGP04278 402 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 CAPN2P17655 700 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 PAFAH1B3Q15102 231 aaKnown RBP18.13■□□□□ 0.49
SSBP3-203ENST00000371319 MGAT5BQ3V5L5 792 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 SLC45A4Q5BKX6 768 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 ANKRD22Q5VYY1 191 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 DENND2CQ68D51 928 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 MSANTD2Q6P1R3 559 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 PCGF5Q86SE9 256 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 RELL1Q8IUW5 271 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 CMTR2Q8IYT2 770 aaKnown RBP18.13■□□□□ 0.49
SSBP3-203ENST00000371319 ARHGAP18Q8N392 663 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 NAT8LQ8N9F0 302 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 ZNF558Q96NG5 402 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 SEPT5Q99719 369 aaPredicted RBP18.13■□□□□ 0.49
SSBP3-203ENST00000371319 TMEM106CQ9BVX2 250 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 COMMD8Q9NX08 183 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 SFMBT1Q9UHJ3 866 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 MRPL42Q9Y6G3 142 aaKnown RBP18.13■□□□□ 0.49
SSBP3-203ENST00000371319 WDR27A2RRH5 827 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 RTN3O95197 1032 aaPredicted RBP18.13■□□□□ 0.49
SSBP3-203ENST00000371319 RPL17P18621 184 aaKnown RBP18.13■□□□□ 0.49
SSBP3-203ENST00000371319 YWHAQP27348 245 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 GYS2P54840 703 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 TPI1P60174 286 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 DUSP4Q13115 394 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 SLC29A2Q14542 456 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 SPOUT1Q5T280 376 aaKnown RBP18.13■□□□□ 0.49
SSBP3-203ENST00000371319 DENND5BQ6ZUT9 1274 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 PPIL6Q8IXY8 311 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 CCDC33Q8N5R6 958 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 GOLGA6L1Q8N7Z2 621 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 COLGALT1Q8NBJ5 622 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 HERC2P3Q9BVR0 1158 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 NINJ2Q9NZG7 142 aa18.13■□□□□ 0.49
SSBP3-203ENST00000371319 ALPK3Q96L96 1907 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 HACD1B0YJ81 288 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 MSI1O43347 362 aaKnown RBP18.12■□□□□ 0.49
SSBP3-203ENST00000371319 BAIAP3O94812 1187 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 SOD2P04179 222 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 HSPA1AP0DMV8 641 aaKnown RBP18.12■□□□□ 0.49
SSBP3-203ENST00000371319 HSPA1BP0DMV9 641 aaKnown RBP18.12■□□□□ 0.49
SSBP3-203ENST00000371319 ERCC2P18074 760 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 ZNF135P52742 658 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-203ENST00000371319 EIF3BP55884 814 aaKnown RBP18.12■□□□□ 0.49
SSBP3-203ENST00000371319 BRMS1LQ5PSV4 323 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 FAM182AQ5T1J6 154 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 HOOK3Q86VS8 718 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 RNF34Q969K3 372 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 FBXO32Q969P5 355 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 OSBPL2Q9H1P3 480 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 IL23AQ9NPF7 189 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 PAK5Q9P286 719 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 NUDT5Q9UKK9 219 aa18.12■□□□□ 0.49
SSBP3-203ENST00000371319 TCRBV7S3A2A0A539 114 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 VAV1P15498 845 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 LAG3P18627 525 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 ATF6P18850 670 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 OR1D2P34982 312 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 RPL10AP62906 217 aaKnown RBP18.11■□□□□ 0.49
SSBP3-203ENST00000371319 DSG1Q02413 1049 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 GAD2Q05329 585 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 BTG3Q14201 252 aaPredicted RBP18.11■□□□□ 0.49
SSBP3-203ENST00000371319 ARTNQ5T4W7 220 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 CEP128Q6ZU80 1094 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 BZW1Q7L1Q6 419 aaKnown RBP18.11■□□□□ 0.49
SSBP3-203ENST00000371319 TAB3Q8N5C8 712 aaPredicted RBP18.11■□□□□ 0.49
SSBP3-203ENST00000371319 CLSTN3Q9BQT9 956 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 OR12D3Q9UGF7 316 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 NEU3Q9UQ49 428 aa18.11■□□□□ 0.49
SSBP3-203ENST00000371319 SLC38A8A6NNN8 435 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 TTC4O95801 387 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 PPP2R5DQ14738 602 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 PRKD1Q15139 912 aaPredicted RBP18.1■□□□□ 0.49
SSBP3-203ENST00000371319 RASIP1Q5U651 963 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 C16orf59Q7L2K0 433 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 UBE2Q1Q7Z7E8 422 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 NETO2Q8NC67 525 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 GIPC2Q8TF65 315 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 TFB1MQ8WVM0 346 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms