RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.55■□□□□ 0.44e-6■□□□□ 8.5
PTP4A1-201ENST00000370651 PHF21AQ96BD5 680 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 USE1Q9NZ43 259 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 SMIM31A0A1B0GVY4 71 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 A0A1B0GW55 424 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 FAM95CA0A1B0GW59 222 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 WFS1O76024 890 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 ARIH2O95376 493 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 VIL1P09327 827 aaKnown RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 DUX4L2P0CJ85 424 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 DUX4L3P0CJ86 424 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 DUX4L4P0CJ87 422 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 DUX4L5P0CJ88 424 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 DUX4L6P0CJ89 424 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 DUX4L7P0CJ90 424 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 RBL1P28749 1068 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 BLVRAP53004 296 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 BST1Q10588 318 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 BST2Q10589 180 aaKnown RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 POU6F1Q14863 301 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 ACAP1Q15027 740 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 PDK3Q15120 406 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 CEP78Q5JTW2 689 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 PRMT6Q96LA8 375 aaPredicted RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 SLC25A23Q9BV35 468 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 CINPQ9BW66 212 aaPredicted RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 SEMA6AQ9H2E6 1030 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 CCDC167Q9P0B6 97 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 DUX4Q9UBX2 424 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 PCDHB8Q9UN66 801 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 DIP2CQ9Y2E4 1556 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 TISP43B9A030 160 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 KDELR1P24390 212 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 VAC14Q08AM6 782 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 ARMCX4Q5H9R4 360 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 CES3Q6UWW8 571 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 TMC7Q7Z402 723 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 FAM9CQ8IZT9 166 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 VGLL2Q8N8G2 317 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 BHLHE22Q8NFJ8 381 aaPredicted RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 HAS1Q92839 578 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 SLITRK1Q96PX8 696 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 BARX2Q9UMQ3 279 aaPredicted RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 COPG1Q9Y678 874 aaKnown RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 SPATA31A1Q5TZJ5 1347 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 RRN3P2A6NIE6 340 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 PGM3O95394 542 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 ZNF682O95780 498 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 TPH1P17752 444 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 LACTB2Q53H82 288 aaPredicted RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 LUZP2Q86TE4 346 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 CROCCP3Q8IVE0 287 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 FAM71AQ8IYT1 594 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 ATP6V0D2Q8N8Y2 350 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 ATG16L2Q8NAA4 619 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 RPRD1AQ96P16 312 aaPredicted RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 CLIC5Q9NZA1 410 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 SPASTQ9UBP0 616 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 EDF1O60869 148 aaKnown RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 SNX17Q15036 470 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 ZNF483Q8TF39 744 aaPredicted RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 WDR41Q9HAD4 459 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 FSCN2O14926 492 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 ZNF862O60290 1169 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 CYBBP04839 570 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 RPL5P46777 297 aaKnown RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 CCT8P50990 548 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 NRF1Q16656 503 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 C10orf120Q5SQS8 335 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 FOXR2Q6PJQ5 311 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 KCNT2Q6UVM3 1135 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 MIER2Q8N344 545 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 RAB42Q8N4Z0 105 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 ALLCQ8N6M5 410 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 KATNAL1Q9BW62 490 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 SAE1Q9UBE0 346 aaPredicted RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 CNOT3O75175 753 aaKnown RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 PIGNO95427 931 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 SERPIND1P05546 499 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 CRABP2P29373 138 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 CSE1LP55060 971 aaKnown RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 MAMLD1Q13495 774 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 LRRC38Q5VT99 294 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 BNIPLQ7Z465 357 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 TTC30BQ8N4P2 665 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 C2orf69Q8N8R5 385 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 ALG3Q92685 438 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 FAM120BQ96EK7 910 aaKnown RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 PWWP2AQ96N64 755 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 SEPT5Q99719 369 aaPredicted RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 ANKRD6Q9Y2G4 727 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 ERI2A8K979 691 aaKnown RBP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 RBAK-RBAKDNI3L0D1 243 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 TRIM24O15164 1050 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 FBXO21O94952 628 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 MYL4P12829 197 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 AMPD1P23109 780 aa17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.54■□□□□ 0.4
PTP4A1-201ENST00000370651 MAGEC3Q8TD91 643 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms