RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ERO1BQ86YB8 467 aa8.78□□□□□ -1
LCA5-201ENST00000369846 RAB43Q86YS6 212 aa8.78□□□□□ -1
LCA5-201ENST00000369846 ZBTB38Q8NAP3 1195 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 FRMD8Q9BZ67 464 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 STARD7Q9NQZ5 370 aa8.78□□□□□ -1
LCA5-201ENST00000369846 CRNNQ9UBG3 495 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 USP21Q9UK80 565 aa8.78□□□□□ -1
LCA5-201ENST00000369846 GTF3C4Q9UKN8 822 aa8.78□□□□□ -1
LCA5-201ENST00000369846 BARX2Q9UMQ3 279 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 PKP3Q9Y446 797 aa8.78□□□□□ -1
LCA5-201ENST00000369846 OVOS2A0A0J9YW53 1432 aa8.78□□□□□ -1
LCA5-201ENST00000369846 OVOS2Q6IE36 1432 aa8.78□□□□□ -1
LCA5-201ENST00000369846 CLDN25C9JDP6 229 aa8.78□□□□□ -1
LCA5-201ENST00000369846 AXIN1O15169 862 aa8.78□□□□□ -1
LCA5-201ENST00000369846 WFS1O76024 890 aa8.78□□□□□ -1
LCA5-201ENST00000369846 SERPINE1P05121 402 aa8.78□□□□□ -1
LCA5-201ENST00000369846 TSPAN19P0C672 248 aa8.78□□□□□ -1
LCA5-201ENST00000369846 TGM2P21980 687 aa8.78□□□□□ -1
LCA5-201ENST00000369846 SLC26A3P40879 764 aa8.78□□□□□ -1
LCA5-201ENST00000369846 POU4F1Q01851 419 aa8.78□□□□□ -1
LCA5-201ENST00000369846 SPIRE1Q08AE8 756 aa8.78□□□□□ -1
LCA5-201ENST00000369846 FASTKQ14296 549 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 KHDC1Q4VXA5 237 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 CCDC157Q569K6 752 aa8.78□□□□□ -1
LCA5-201ENST00000369846 BHLHB9Q6PI77 547 aa8.78□□□□□ -1
LCA5-201ENST00000369846 EIF3MQ7L2H7 374 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 POLNQ7Z5Q5 900 aa8.78□□□□□ -1
LCA5-201ENST00000369846 PQLC1Q8N2U9 271 aa8.78□□□□□ -1
LCA5-201ENST00000369846 VPS37AQ8NEZ2 397 aa8.78□□□□□ -1
LCA5-201ENST00000369846 NEDD1Q8NHV4 660 aa8.78□□□□□ -1
LCA5-201ENST00000369846 FAM120BQ96EK7 910 aaKnown RBP8.78□□□□□ -1
LCA5-201ENST00000369846 C7orf25Q9BPX7 421 aa8.78□□□□□ -1
LCA5-201ENST00000369846 SH2D3AQ9BRG2 576 aa8.78□□□□□ -1
LCA5-201ENST00000369846 ACAT2Q9BWD1 397 aa8.78□□□□□ -1
LCA5-201ENST00000369846 TPK1Q9H3S4 243 aa8.78□□□□□ -1
LCA5-201ENST00000369846 TMEM138Q9NPI0 162 aa8.78□□□□□ -1
LCA5-201ENST00000369846 CUEDC1Q9NWM3 386 aaPredicted RBP8.78□□□□□ -1
LCA5-201ENST00000369846 NCKIPSDQ9NZQ3 722 aa8.78□□□□□ -1
LCA5-201ENST00000369846 UMODL1Q5DID0 1318 aa8.78□□□□□ -1
LCA5-201ENST00000369846 PNMA6FA0A0J9YX94 578 aa8.77□□□□□ -1
LCA5-201ENST00000369846 DFFAO00273 331 aa8.77□□□□□ -1
LCA5-201ENST00000369846 GSC2O15499 205 aa8.77□□□□□ -1
LCA5-201ENST00000369846 P4HBP07237 508 aaKnown RBP8.77□□□□□ -1
LCA5-201ENST00000369846 CYP4F2P78329 520 aa8.77□□□□□ -1
LCA5-201ENST00000369846 AMPD2Q01433 879 aa8.77□□□□□ -1
LCA5-201ENST00000369846 CYP4F3Q08477 520 aa8.77□□□□□ -1
LCA5-201ENST00000369846 PIGHQ14442 188 aaPredicted RBP8.77□□□□□ -1
LCA5-201ENST00000369846 RABL6Q3YEC7 729 aaPredicted RBP8.77□□□□□ -1
LCA5-201ENST00000369846 IQCKQ8N0W5 287 aa8.77□□□□□ -1
LCA5-201ENST00000369846 FITM2Q8N6M3 262 aa8.77□□□□□ -1
LCA5-201ENST00000369846 EMC1Q8N766 993 aa8.77□□□□□ -1
LCA5-201ENST00000369846 EFHD2Q96C19 240 aaPredicted RBP8.77□□□□□ -1
LCA5-201ENST00000369846 L3MBTL3Q96JM7 780 aaPredicted RBP8.77□□□□□ -1
LCA5-201ENST00000369846 CLPTM1LQ96KA5 538 aa8.77□□□□□ -1
LCA5-201ENST00000369846 OSBPL11Q9BXB4 747 aa8.77□□□□□ -1
LCA5-201ENST00000369846 CXorf21Q9HAI6 301 aa8.77□□□□□ -1
LCA5-201ENST00000369846 TOR4AQ9NXH8 423 aa8.77□□□□□ -1
LCA5-201ENST00000369846 KCNK4Q9NYG8 393 aa8.77□□□□□ -1
LCA5-201ENST00000369846 NKIRAS2Q9NYR9 191 aa8.77□□□□□ -1
LCA5-201ENST00000369846 TUBGCP4Q9UGJ1 667 aa8.77□□□□□ -1
LCA5-201ENST00000369846 ATPIF1Q9UII2 106 aa8.77□□□□□ -1
LCA5-201ENST00000369846 ZSCAN5BA6NJL1 495 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 SLCO1B7G3V0H7 640 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 UBE2Q2LH0YL09 131 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 PIK3CDO00329 1044 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 TOR1BO14657 336 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FARP2O94887 1054 aaPredicted RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 APBA3O96018 575 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 C6orf222P0C671 652 aaPredicted RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 AZGP1P25311 298 aaKnown RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 SOAT1P35610 550 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FDFT1P37268 417 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 PTGER2P43116 358 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 NAMPTP43490 491 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 CRKP46108 304 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 SLC9A3P48764 834 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 RGS7P49802 495 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 LACTB2Q53H82 288 aaPredicted RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 FAM47CQ5HY64 1035 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 AAGABQ6PD74 315 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 CRTC3Q6UUV7 619 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 HAUS6Q7Z4H7 955 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FAM136AQ96C01 138 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 ZNF333Q96JL9 665 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 ZC3H10Q96K80 434 aaKnown RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 SLC4A9Q96Q91 983 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 HGH1Q9BTY7 390 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 GSDMCQ9BYG8 508 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 PRRG3Q9BZD7 231 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 HSD3B7Q9H2F3 369 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 UCKL1Q9NWZ5 548 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 NUP50Q9UKX7 468 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 GNEQ9Y223 722 aaKnown RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 PRPF4O43172 522 aaKnown RBP eCLIP8.77□□□□□ -1.01
LCA5-201ENST00000369846 CIAO1O76071 339 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 SFNP31947 248 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 MAGEA10P43363 369 aaPredicted RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 FBXW4P57775 412 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 PURAQ00577 322 aaKnown RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 PLCL1Q15111 1095 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms