RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LRRC63Q05C16 580 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 ADIGQ0VDE8 80 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 PLEKHG6Q3KR16 790 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 PKDCCQ504Y2 493 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 MPPE1Q53F39 396 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 WDR45BQ5MNZ6 344 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 BSPRYQ5W0U4 402 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 TMPRSS6Q8IU80 811 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 FMNL3Q8IVF7 1028 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 CADM4Q8NFZ8 388 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 OR2I1PQ8NGU4 316 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 UBA3Q8TBC4 463 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 TOE1Q96GM8 510 aaKnown RBP16.74■□□□□ 0.27
CKS1B-202ENST00000368436 HESX1Q9UBX0 185 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 ARMCX3Q9UH62 379 aaPredicted RBP16.74■□□□□ 0.27
CKS1B-202ENST00000368436 MUC22E2RYF6 1773 aaPredicted RBP16.74■□□□□ 0.27
CKS1B-202ENST00000368436 TRIM49BA6NDI0 452 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 SYNCRIPO60506 623 aaKnown RBP16.73■□□□□ 0.27
CKS1B-202ENST00000368436 LATS1O95835 1130 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 SETSIPP0DME0 302 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 C7P10643 843 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 NCAM1P13591 858 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 CD19P15391 556 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 GNSP15586 552 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 TBXAS1P24557 533 aaPredicted RBP16.73■□□□□ 0.27
CKS1B-202ENST00000368436 PRKCHP24723 683 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 MAOBP27338 520 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 HOXD9P28356 352 aaPredicted RBP16.73■□□□□ 0.27
CKS1B-202ENST00000368436 OXTRP30559 389 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 HARS2P49590 506 aaKnown RBP16.73■□□□□ 0.27
CKS1B-202ENST00000368436 TPMTP51580 245 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 COPAP53621 1224 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 ZNF445P59923 1031 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 SIM1P81133 766 aaPredicted RBP16.73■□□□□ 0.27
CKS1B-202ENST00000368436 SLC14A1Q13336 389 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 RNF139Q8WU17 664 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 EDEM1Q92611 657 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 GATA6Q92908 595 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 SIPA1Q96FS4 1042 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
CKS1B-202ENST00000368436 GTPBP4Q9BZE4 634 aaKnown RBP16.73■□□□□ 0.27
CKS1B-202ENST00000368436 CNGB3Q9NQW8 809 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 ABCC13Q9NSE7 274 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 SFMBT1Q9UHJ3 866 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 NEUROG3Q9Y4Z2 214 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 FRYQ5TBA9 3013 aa16.73■□□□□ 0.27
CKS1B-202ENST00000368436 PMM2O15305 246 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 GABBR2O75899 941 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 SMC2O95347 1197 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 DAOAP59103 153 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 HNRNPDQ14103 355 aaKnown RBP16.72■□□□□ 0.27
CKS1B-202ENST00000368436 ADGRF1Q5T601 910 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 LCLAT1Q6UWP7 414 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 KIAA0907Q7Z7F0 614 aaPredicted RBP16.72■□□□□ 0.27
CKS1B-202ENST00000368436 SIX6OS1Q8N1H7 587 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 SORCS1Q8WY21 1168 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 PRCCQ92733 491 aaPredicted RBP16.72■□□□□ 0.27
CKS1B-202ENST00000368436 TIGD1Q96MW7 591 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 GPR174Q9BXC1 333 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 CIPCQ9C0C6 399 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 METTL14Q9HCE5 456 aaKnown RBP16.72■□□□□ 0.27
CKS1B-202ENST00000368436 ZMIZ1Q9ULJ6 1067 aa16.72■□□□□ 0.27
CKS1B-202ENST00000368436 A0A1B0GTW7 788 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 FAM221BA6H8Z2 402 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 TMEM8BA6NDV4 472 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 METTL12A8MUP2 240 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 HYAL3O43820 417 aaPredicted RBP16.71■□□□□ 0.27
CKS1B-202ENST00000368436 TSPAN3O60637 253 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 PAEPP09466 180 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 HLA-FP30511 346 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 FMO5P49326 533 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 FAM193AP78312 1265 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 LRMPQ12912 555 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 CAMK2GQ13555 558 aaPredicted RBP16.71■□□□□ 0.27
CKS1B-202ENST00000368436 MSANTD2Q6P1R3 559 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 SERPINA13PQ6UXR4 307 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.71■□□□□ 0.27
CKS1B-202ENST00000368436 WFIKKN2Q8TEU8 576 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 SLC35F5Q8WV83 523 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 TFAP2BQ92481 460 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 ERCC4Q92889 916 aaPredicted RBP16.71■□□□□ 0.27
CKS1B-202ENST00000368436 SMARCE1Q969G3 411 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 TMA16Q96EY4 203 aaKnown RBP16.71■□□□□ 0.27
CKS1B-202ENST00000368436 DHTKD1Q96HY7 919 aaPredicted RBP16.71■□□□□ 0.27
CKS1B-202ENST00000368436 NUP58Q9BVL2 599 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 IRX2Q9BZI1 471 aaPredicted RBP16.71■□□□□ 0.27
CKS1B-202ENST00000368436 ZDHHC5Q9C0B5 715 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 TMEM245Q9H330 911 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 MSRB2Q9Y3D2 182 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 CHD6Q8TD26 2715 aa16.71■□□□□ 0.27
CKS1B-202ENST00000368436 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 MEI4A8MW99 385 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 H0Y626 953 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 RNF225M0QZC1 329 aaPredicted RBP16.7■□□□□ 0.26
CKS1B-202ENST00000368436 TRIM16O95361 564 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 IGLV3-27P01718 113 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 EPHX1P07099 455 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 LCP1P13796 627 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 GRIK2Q13002 908 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 CNGA2Q16280 664 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms