RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 C1orf21Q9H246 121 aa14.74□□□□□ -0.05
CD48-201ENST00000368045 ZFATQ9P243 1243 aa14.74□□□□□ -0.05
CD48-201ENST00000368045 ZNF212Q9UDV6 495 aa14.74□□□□□ -0.05
CD48-201ENST00000368045 C2orf71A6NGG8 1288 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 RRN3P2A6NIE6 340 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 B2RBV5 119 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 H3BRB1 525 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 MAP3K6O95382 1288 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 ZNF286BP0CG31 522 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 PGAM1P18669 254 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 TFE3P19532 575 aaPredicted RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 PNPLA4P41247 253 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 AQP5P55064 265 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 CCNA1P78396 465 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 INSCQ1MX18 579 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 TRMT5Q32P41 509 aaKnown RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 MARCH8Q5T0T0 291 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 C6orf163Q5TEZ5 329 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 C9orf57Q5W0N0 161 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 CAPRIN2Q6IMN6 1127 aaKnown RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 NET1Q7Z628 596 aaPredicted RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 ADGRF2Q8IZF7 708 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 PDCD7Q8N8D1 485 aaKnown RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 ZMAT2Q96NC0 199 aaKnown RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 CCDC106Q9BWC9 280 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 OSBPL1AQ9BXW6 950 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 TUT1Q9H6E5 874 aaKnown RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 DCDC2Q9UHG0 476 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 FZD10Q9ULW2 581 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 UBQLN1Q9UMX0 589 aaKnown RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 NME7Q9Y5B8 376 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 H3BRJ5 948 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 PPEF2O14830 753 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 CIB2O75838 187 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 KRT36O76013 467 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 CD4P01730 458 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 SKIP12755 728 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 AOC1P19801 751 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 MATKP42679 507 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 GLUD2P49448 558 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 SLC25A52Q3SY17 297 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 GJC2Q5T442 439 aaPredicted RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 SNX30Q5VWJ9 437 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 CES4AQ5XG92 561 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 IRGCQ6NXR0 463 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 NOTUMQ6P988 496 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 ALKAL1Q6UXT8 129 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 DLK2Q6UY11 383 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 DENND5BQ6ZUT9 1274 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 WDR75Q8IWA0 830 aaKnown RBP14.73□□□□□ -0.05
CD48-201ENST00000368045 KIRREL3Q8IZU9 778 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 PPFIBP2Q8ND30 876 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 PPP1R14CQ8TAE6 165 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 MICAL1Q8TDZ2 1067 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 ZNF560Q96MR9 790 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 SGIP1Q9BQI5 828 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 ADAMTS10Q9H324 1103 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 NMRK1Q9NWW6 199 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 GDAP2Q9NXN4 497 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 SNTG2Q9NY99 539 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 ARMCX1Q9P291 453 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 DNAJB4Q9UDY4 337 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 TUBGCP4Q9UGJ1 667 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 ANGPTL2Q9UKU9 493 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 LRCH1Q9Y2L9 728 aa14.73□□□□□ -0.05
CD48-201ENST00000368045 CCDC195A0A1B0GUA6 201 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 WDR27A2RRH5 827 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 CYB561D2O14569 222 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 XPOTO43592 962 aaKnown RBP14.72□□□□□ -0.05
CD48-201ENST00000368045 DAB1O75553 588 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 TM7SF2O76062 418 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 ENO1P06733 434 aaKnown RBP14.72□□□□□ -0.05
CD48-201ENST00000368045 MYL4P12829 197 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 VAV1P15498 845 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 AMPD1P23109 780 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 GRK2P25098 689 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 HOXA11P31270 313 aaPredicted RBP14.72□□□□□ -0.05
CD48-201ENST00000368045 GNL1P36915 607 aaPredicted RBP14.72□□□□□ -0.05
CD48-201ENST00000368045 AP1B1Q10567 949 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 LBRQ14739 615 aaKnown RBP14.72□□□□□ -0.05
CD48-201ENST00000368045 PDK1Q15118 436 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 FASTKD1Q53R41 847 aaKnown RBP14.72□□□□□ -0.05
CD48-201ENST00000368045 TRIM68Q6AZZ1 485 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 ANO7Q6IWH7 933 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 PACS1Q6VY07 963 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 LRRC74BQ6ZQY2 392 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 LIMS2Q7Z4I7 341 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 TREML1Q86YW5 311 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 CCDC185Q8N715 623 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 COLGALT1Q8NBJ5 622 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 SNX25Q9H3E2 840 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 XPNPEP3Q9NQH7 507 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 PLA2G4CQ9UP65 541 aa14.72□□□□□ -0.05
CD48-201ENST00000368045 GOLGB1Q14789 3259 aaKnown RBP14.71□□□□□ -0.05
CD48-201ENST00000368045 RALGAPA2Q2PPJ7 1873 aa14.71□□□□□ -0.05
CD48-201ENST00000368045 PIRO00625 290 aa14.71□□□□□ -0.05
CD48-201ENST00000368045 CAPN9O14815 690 aa14.71□□□□□ -0.05
CD48-201ENST00000368045 XPO1O14980 1071 aaKnown RBP14.71□□□□□ -0.05
CD48-201ENST00000368045 PLIN3O60664 434 aa14.71□□□□□ -0.05
CD48-201ENST00000368045 KLHL2O95198 593 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms