RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ADGRG6Q86SQ4 1221 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 RBM23Q86U06 439 aaKnown RBP11.94□□□□□ -0.5
USF1-201ENST00000368019 THNSL1Q8IYQ7 743 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 ZBED8Q8IZ13 594 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 GALNT15Q8N3T1 639 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 COLGALT1Q8NBJ5 622 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 PYROXD1Q8WU10 500 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 CPA5Q8WXQ8 436 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 SUSD6Q92537 303 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 FNBP1Q96RU3 617 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 PAFAH2Q99487 392 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 OSMRQ99650 979 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 MIPEPQ99797 713 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 SIKE1Q9BRV8 207 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 TSSK1BQ9BXA7 367 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 HEMGNQ9BXL5 484 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 KIF9Q9HAQ2 790 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 SLC24A3Q9HC58 644 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 GPAMQ9HCL2 828 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 TLR9Q9NR96 1032 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 TOPORSQ9NS56 1045 aaPredicted RBP11.94□□□□□ -0.5
USF1-201ENST00000368019 RNF19AQ9NV58 838 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 TMEM161AQ9NX61 479 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 DDX43Q9NXZ2 648 aaKnown RBP11.94□□□□□ -0.5
USF1-201ENST00000368019 CNTN3Q9P232 1028 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 SCOCQ9UIL1 159 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 STRIP2Q9ULQ0 834 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 BARX2Q9UMQ3 279 aaPredicted RBP11.94□□□□□ -0.5
USF1-201ENST00000368019 SORCS3Q9UPU3 1222 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 CACNA1HO95180 2353 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 KLHL33A6NCF5 533 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 FOXO6A8MYZ6 492 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 HNRNPDLO14979 420 aaKnown RBP11.93□□□□□ -0.5
USF1-201ENST00000368019 PER2O15055 1255 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 STBD1O95210 358 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 CBX6O95503 412 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 VTNP04004 478 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 KRT7P08729 469 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 KRT4P19013 534 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 GLRA2P23416 452 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 CLCN2P51788 898 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 PLCB3Q01970 1234 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 ACAP1Q15027 740 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 CCDC6Q16204 474 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 UGCGQ16739 394 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 TRMT5Q32P41 509 aaKnown RBP11.93□□□□□ -0.5
USF1-201ENST00000368019 WDR72Q3MJ13 1102 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 DNAL1Q4LDG9 190 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 PPP1R15BQ5SWA1 713 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 SNX30Q5VWJ9 437 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 PDE12Q6L8Q7 609 aaKnown RBP11.93□□□□□ -0.5
USF1-201ENST00000368019 TMEM184AQ6ZMB5 413 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 C4orf33Q8N1A6 199 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 TMEM35BQ8NCS4 154 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 TCP10LQ8TDR4 215 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 DCAKDQ8WVC6 231 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 TEKT4Q8WW24 435 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 SPOCK2Q92563 424 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 C7orf26Q96N11 449 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 CYTH2Q99418 400 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 CDCA3Q99618 268 aaPredicted RBP11.93□□□□□ -0.5
USF1-201ENST00000368019 ADAMTS10Q9H324 1103 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 GPRC5CQ9NQ84 441 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 KCNK4Q9NYG8 393 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 IL1RAPL1Q9NZN1 696 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 ZNF180Q9UJW8 692 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 PCDHGC3Q9UN70 934 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 LZTS1Q9Y250 596 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 SSX2IPQ9Y2D8 614 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 PPME1Q9Y570 386 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 PCDHB4Q9Y5E5 795 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 PCDHA10Q9Y5I2 948 aa11.93□□□□□ -0.5
USF1-201ENST00000368019 A0A1W2PPM1 405 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 GYG2O15488 501 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 ZNF862O60290 1169 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 PSAPP07602 524 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 FGFR1P11362 822 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 ATF7P17544 494 aaPredicted RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 EIF4BP23588 611 aaKnown RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 ADRA1DP25100 572 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 CCNFP41002 786 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 PAPOLAP51003 745 aaKnown RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 FASTKD3Q14CZ7 662 aaKnown RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 SURF1Q15526 300 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 ACSBG2Q5FVE4 666 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 C6orf163Q5TEZ5 329 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 TDRD10Q5VZ19 366 aaKnown RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 OR52E8Q6IFG1 317 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 DNAJC24Q6P3W2 148 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 AAGABQ6PD74 315 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 TRIM67Q6ZTA4 783 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 ANO5Q75V66 913 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 NET1Q7Z628 596 aaPredicted RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 MTDHQ86UE4 582 aaKnown RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 TMPRSS6Q8IU80 811 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 PDIK1LQ8N165 341 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 TTC8Q8TAM2 541 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 SLC44A1Q8WWI5 657 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 BSNDQ8WZ55 320 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms