RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 COMMD8Q9NX08 183 aa15.42■□□□□ 0.06
VAMP4-202ENST00000367740 NYNRINQ9P2P1 1898 aaKnown RBP15.42■□□□□ 0.06
VAMP4-202ENST00000367740 A0A1W2PR77 199 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 WNT9AO14904 365 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 TNNC2P02585 160 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 GARTP22102 1010 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 ATP5C1P36542 298 aaKnown RBP15.41■□□□□ 0.06
VAMP4-202ENST00000367740 ARRB1P49407 418 aaPredicted RBP15.41■□□□□ 0.06
VAMP4-202ENST00000367740 ZBTB16Q05516 673 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 E2F5Q15329 346 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 ATG14Q6ZNE5 492 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 ZMIZ2Q8NF64 920 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 NOC3LQ8WTT2 800 aaKnown RBP15.41■□□□□ 0.06
VAMP4-202ENST00000367740 RAD54LQ92698 747 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 SKA1Q96BD8 255 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 TMEM245Q9H330 911 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 TLR8Q9NR97 1041 aaKnown RBP15.41■□□□□ 0.06
VAMP4-202ENST00000367740 NOTCH2Q04721 2471 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 ATP8B3O60423 1300 aa15.41■□□□□ 0.06
VAMP4-202ENST00000367740 A8MXQ7 604 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 STC2O76061 302 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 KLKB1P03952 638 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 DNTTP04053 509 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 CD38P28907 300 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 LSSP48449 732 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 L1TD1Q5T7N2 865 aaKnown RBP15.4■□□□□ 0.06
VAMP4-202ENST00000367740 CDCP2Q5VXM1 449 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 SMARCD1Q96GM5 515 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 PCIF1Q9H4Z3 704 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 POLR1BQ9H9Y6 1135 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 AASDHPPTQ9NRN7 309 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 THSD1Q9NS62 852 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 STARD5Q9NSY2 213 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 NUDT5Q9UKK9 219 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 EXOC7Q9UPT5 735 aa15.4■□□□□ 0.06
VAMP4-202ENST00000367740 FAM47DPA6NHR8 397 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 SLC26A4O43511 780 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 USP12O75317 370 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 RXRGP48443 463 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 NXPH1P58417 271 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 ANAPC15P60006 121 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 SKOR1P84550 965 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 E2F1Q01094 437 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 TTC31Q49AM3 519 aaPredicted RBP15.39■□□□□ 0.05
VAMP4-202ENST00000367740 DYMQ7RTS9 669 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 CCDC83Q8IWF9 413 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 CALML4Q96GE6 196 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 ACCSQ96QU6 501 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 MED10Q9BTT4 135 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 FBRSQ9HAH7 460 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 PRSS16Q9NQE7 514 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 KRT82Q9NSB4 513 aa15.39■□□□□ 0.05
VAMP4-202ENST00000367740 C10orf142B7Z368 130 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 CYP26A1O43174 497 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 SUV39H1O43463 412 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 AP1G2O75843 785 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 BEST1O76090 585 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 PRPF6O94906 941 aaKnown RBP15.38■□□□□ 0.05
VAMP4-202ENST00000367740 CST3P01034 146 aaPredicted RBP15.38■□□□□ 0.05
VAMP4-202ENST00000367740 FAM163BP0C2L3 166 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 PLA2G4AP47712 749 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 CASP5P51878 434 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 ARID5AQ03989 594 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 KCNJ12Q14500 433 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 DUOXA2Q1HG44 320 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 FNDC3BQ53EP0 1204 aaKnown RBP15.38■□□□□ 0.05
VAMP4-202ENST00000367740 KLHDC10Q6PID8 442 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 NCEH1Q6PIU2 408 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 TRAPPC11Q7Z392 1133 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 GPD1LQ8N335 351 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 CYB5D2Q8WUJ1 264 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 LARP4BQ92615 738 aaKnown RBP15.38■□□□□ 0.05
VAMP4-202ENST00000367740 SMOQ99835 787 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 FBXO44Q9H4M3 255 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 NMUR1Q9HB89 426 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 SERGEFQ9UGK8 458 aa15.38■□□□□ 0.05
VAMP4-202ENST00000367740 TRIM38O00635 465 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 SIGLEC6O43699 453 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
VAMP4-202ENST00000367740 MYF5P13349 255 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 CHKAP35790 457 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 GALCP54803 685 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 TNNC1P63316 161 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 UBAP2LQ14157 1087 aaKnown RBP15.37■□□□□ 0.05
VAMP4-202ENST00000367740 WDR72Q3MJ13 1102 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 LINC00303Q3SY05 128 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 IGF2-ASQ6U949 168 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 CCDC81Q6ZN84 652 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 GPRIN1Q7Z2K8 1008 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 SPATS2Q86XZ4 545 aaKnown RBP15.37■□□□□ 0.05
VAMP4-202ENST00000367740 WDR49Q8IV35 697 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 FUKQ8N0W3 1084 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 OXR1Q8N573 874 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 DEPDC7Q96QD5 511 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 GZF1Q9H116 711 aaPredicted RBP15.37■□□□□ 0.05
VAMP4-202ENST00000367740 MRPL44Q9H9J2 332 aaKnown RBP15.37■□□□□ 0.05
VAMP4-202ENST00000367740 ERVMER34-1Q9H9K5 563 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.37■□□□□ 0.05
VAMP4-202ENST00000367740 TBC1D7Q9P0N9 293 aa15.37■□□□□ 0.05
VAMP4-202ENST00000367740 A0A1W2PQH9 124 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms