RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ABCB10Q9NRK6 738 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CPNE7Q9UBL6 633 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SLCO3A1Q9UIG8 710 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ST3GAL5Q9UNP4 418 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SNX13Q9Y5W8 968 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 IRAK3Q9Y616 596 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 DNALI1O14645 258 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 IL7RP16871 459 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RGS6P49758 472 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TANGO2Q6ICL3 276 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ING5Q8WYH8 240 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF70Q9UC06 446 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RAB23Q9ULC3 237 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PRAF2O60831 178 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PFKFB1P16118 471 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TSNQ15631 228 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SMU1Q2TAY7 513 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GRAMD1BQ3KR37 738 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TTMPQ5BVD1 217 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RALGPS1Q5JS13 557 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ADHFE1Q8IWW8 467 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SUPT20HQ8NEM7 779 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 C7orf50Q9BRJ6 194 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 HPS4Q9NQG7 708 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SEC31BQ9NQW1 1179 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CYP39A1Q9NYL5 469 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF608Q9ULD9 1512 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CYP2D7A0A087X1C5 515 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TRIM64A6NGJ6 449 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MFN2O95140 757 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CSF3P09919 207 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ARL4AP40617 200 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MNDAP41218 407 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CASP4P49662 377 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 BTG3Q14201 252 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 BRMS1LQ5PSV4 323 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MAN2B2Q9Y2E5 1009 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SMLR1H3BR10 107 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ACSL3O95573 720 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ENO3P13929 434 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 DPP6P42658 865 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 AMPD2Q01433 879 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 NR1I3Q14994 352 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SPATA20Q8TB22 786 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RILPQ96NA2 401 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 INO80BQ9C086 356 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PAK6Q9NQU5 681 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CTNND2Q9UQB3 1225 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 DGKBQ9Y6T7 804 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PLIN4Q96Q06 1357 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 FOXO6A8MYZ6 492 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SERPINA6P08185 405 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GGCXP38435 758 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SSX2Q16385 188 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ARMCX5Q6P1M9 558 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 FMR1NBQ8N0W7 255 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZFP28Q8NHY6 868 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PHYHIPQ92561 330 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ARHGAP23Q9P227 1491 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 C7orf25Q9BPX7 421 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 COPS4Q9BT78 406 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 JPH1Q9HDC5 661 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 LATO43561 262 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 FBXO21O94952 628 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 IL1R1P14778 569 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 NRIP1P48552 1158 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SLC26A2P50443 739 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PABPC4Q13310 644 aaKnown RBP eCLIP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 USP10Q14694 798 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RSU1Q15404 277 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 COPS6Q7L5N1 327 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 AVL9Q8NBF6 648 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GLG1Q92896 1179 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TOPORSQ9NS56 1045 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 DNAJC6O75061 913 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GLP2RO95838 553 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ANGPTL1O95841 491 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SOX9P48436 509 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 HES5Q5TA89 166 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 C12orf56Q8IXR9 622 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RIN2Q8WYP3 895 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GJA10Q969M2 543 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TCF7L2Q9NQB0 619 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PCDHGB4Q9UN71 923 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GRIP1Q9Y3R0 1128 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 AP1G1O43747 822 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GSTM1P09488 218 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GYS1P13807 737 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ETV1P50549 477 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GSTM4Q03013 218 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TTLL12Q14166 644 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 C15orf52Q6ZUT6 534 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CCDC28AQ8IWP9 274 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 EID2Q8N6I1 236 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ANGPTL6Q8NI99 470 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CDV3Q9UKY7 258 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SNX7Q9UNH6 387 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PCDHA13Q9Y5I0 950 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TRMUO75648 421 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PTPN7P35236 360 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms