RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PRAMEF18Q5VWM3 479 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 PDPK2PQ6A1A2 396 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 C12orf29Q8N999 325 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 ADAM32Q8TC27 787 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 FNIP1Q8TF40 1166 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 LPAR1Q92633 364 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 VCX3BQ9H321 246 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 VCX3AQ9NNX9 186 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 DDX18Q9NVP1 670 aaKnown RBP14.01□□□□□ -0.17
PRKN-205ENST00000366897 ASNSD1Q9NWL6 643 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 MAGED2Q9UNF1 606 aaPredicted RBP14.01□□□□□ -0.17
PRKN-205ENST00000366897 C15orf38-AP3S2A0A0A6YYH1 394 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 GOLGA8QA0A0J9YX86 632 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 GOLGA8OA6NCC3 632 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 GOLGA8NF8WBI6 632 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 WNT10BO00744 389 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 NFICP08651 508 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 FOLH1Q04609 750 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 PTPN11Q06124 597 aaPredicted RBP14.01□□□□□ -0.17
PRKN-205ENST00000366897 LSAMPQ13449 338 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 ITGA9Q13797 1035 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 TTLL12Q14166 644 aaPredicted RBP14.01□□□□□ -0.17
PRKN-205ENST00000366897 TLR1Q15399 786 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 FAM183BPQ6ZVS7 135 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 ARPINQ7Z6K5 226 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 GSDMBQ8TAX9 411 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 TRAPPC12Q8WVT3 735 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 GMLQ99445 158 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 SIX4Q9UIU6 781 aa14.01□□□□□ -0.17
PRKN-205ENST00000366897 ZBTB14O43829 449 aa14□□□□□ -0.17
PRKN-205ENST00000366897 TBC1D12O60347 775 aa14□□□□□ -0.17
PRKN-205ENST00000366897 DGKIO75912 1065 aa14□□□□□ -0.17
PRKN-205ENST00000366897 GPD1P21695 349 aa14□□□□□ -0.17
PRKN-205ENST00000366897 TCF7P36402 384 aaPredicted RBP14□□□□□ -0.17
PRKN-205ENST00000366897 PGGT1BP53609 377 aa14□□□□□ -0.17
PRKN-205ENST00000366897 DEUP1Q05D60 604 aa14□□□□□ -0.17
PRKN-205ENST00000366897 OLIG2Q13516 323 aa14□□□□□ -0.17
PRKN-205ENST00000366897 HNRNPDQ14103 355 aaKnown RBP14□□□□□ -0.17
PRKN-205ENST00000366897 TFDP2Q14188 446 aa14□□□□□ -0.17
PRKN-205ENST00000366897 ZNF667Q5HYK9 610 aa14□□□□□ -0.17
PRKN-205ENST00000366897 CMC1Q7Z7K0 106 aa14□□□□□ -0.17
PRKN-205ENST00000366897 CLMNQ96JQ2 1002 aa14□□□□□ -0.17
PRKN-205ENST00000366897 PHF12Q96QT6 1004 aa14□□□□□ -0.17
PRKN-205ENST00000366897 SORT1Q99523 831 aa14□□□□□ -0.17
PRKN-205ENST00000366897 EBNA1BP2Q99848 306 aaKnown RBP14□□□□□ -0.17
PRKN-205ENST00000366897 PREBQ9HCU5 417 aa14□□□□□ -0.17
PRKN-205ENST00000366897 APPL1Q9UKG1 709 aa14□□□□□ -0.17
PRKN-205ENST00000366897 COL2A1P02458 1487 aaPredicted RBP14□□□□□ -0.17
PRKN-205ENST00000366897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14□□□□□ -0.17
PRKN-205ENST00000366897 FAM159BA6NKW6 160 aa14□□□□□ -0.17
PRKN-205ENST00000366897 APOL1O14791 398 aa14□□□□□ -0.17
PRKN-205ENST00000366897 OGTO15294 1046 aa14□□□□□ -0.17
PRKN-205ENST00000366897 HNRNPRO43390 633 aaKnown RBP14□□□□□ -0.17
PRKN-205ENST00000366897 TNNC2P02585 160 aa14□□□□□ -0.17
PRKN-205ENST00000366897 ITGB3P05106 788 aa14□□□□□ -0.17
PRKN-205ENST00000366897 PRKCBP05771 671 aa14□□□□□ -0.17
PRKN-205ENST00000366897 ZNF143P52747 638 aaPredicted RBP14□□□□□ -0.17
PRKN-205ENST00000366897 SLC10A2Q12908 348 aaPredicted RBP14□□□□□ -0.17
PRKN-205ENST00000366897 PCLAFQ15004 111 aa14□□□□□ -0.17
PRKN-205ENST00000366897 MAP1SQ66K74 1059 aaPredicted RBP14□□□□□ -0.17
PRKN-205ENST00000366897 SESTD1Q86VW0 696 aa14□□□□□ -0.17
PRKN-205ENST00000366897 ARHGAP18Q8N392 663 aa14□□□□□ -0.17
PRKN-205ENST00000366897 FAM81AQ8TBF8 368 aa14□□□□□ -0.17
PRKN-205ENST00000366897 NCSTNQ92542 709 aa14□□□□□ -0.17
PRKN-205ENST00000366897 HIC2Q96JB3 615 aa14□□□□□ -0.17
PRKN-205ENST00000366897 NLRP4Q96MN2 994 aa14□□□□□ -0.17
PRKN-205ENST00000366897 PCYT2Q99447 389 aa14□□□□□ -0.17
PRKN-205ENST00000366897 C1orf21Q9H246 121 aa14□□□□□ -0.17
PRKN-205ENST00000366897 TMEM216Q9P0N5 145 aa14□□□□□ -0.17
PRKN-205ENST00000366897 PGAP2Q9UHJ9 254 aa14□□□□□ -0.17
PRKN-205ENST00000366897 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
PRKN-205ENST00000366897 H3BNX3 289 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 INO80B-WBP1J3KQ70 363 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 AIM2O14862 343 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 CCNT2O60583 730 aaKnown RBP13.99□□□□□ -0.17
PRKN-205ENST00000366897 PABPC4LP0CB38 370 aaKnown RBP13.99□□□□□ -0.17
PRKN-205ENST00000366897 CYP3A5P20815 502 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 GPD2P43304 727 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 IYDQ6PHW0 289 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRKN-205ENST00000366897 MCRS1Q96EZ8 462 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 OLFM3Q96PB7 478 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 HAPLN3Q96S86 360 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 ACO2Q99798 780 aaKnown RBP13.99□□□□□ -0.17
PRKN-205ENST00000366897 SNRNP25Q9BV90 132 aaKnown RBP13.99□□□□□ -0.17
PRKN-205ENST00000366897 MRPL4Q9BYD3 311 aaKnown RBP13.99□□□□□ -0.17
PRKN-205ENST00000366897 INO80BQ9C086 356 aaPredicted RBP13.99□□□□□ -0.17
PRKN-205ENST00000366897 PCDH18Q9HCL0 1135 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 UBAP1Q9NZ09 502 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 CPSF3Q9UKF6 684 aaKnown RBP13.99□□□□□ -0.17
PRKN-205ENST00000366897 AFG3L2Q9Y4W6 797 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
PRKN-205ENST00000366897 SF3B1O75533 1304 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRKN-205ENST00000366897 C2CD4BA6NLJ0 364 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 SPATA31C2B4DYI2 1134 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 NEMP1O14524 444 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 PLIN3O60664 434 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 PMLP29590 882 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 SERPINB5P36952 375 aa13.99□□□□□ -0.17
PRKN-205ENST00000366897 HMGCS2P54868 508 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms