RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 ACO1P21399 889 aaKnown RBP12.33□□□□□ -0.43
CDC42BPA-203ENST00000366766 ELK3P41970 407 aa12.33□□□□□ -0.43
CDC42BPA-203ENST00000366766 METTL3Q86U44 580 aaKnown RBP12.33□□□□□ -0.43
CDC42BPA-203ENST00000366766 ITIH5Q86UX2 942 aa12.33□□□□□ -0.43
CDC42BPA-203ENST00000366766 CCDC28BQ9BUN5 200 aa12.33□□□□□ -0.43
CDC42BPA-203ENST00000366766 SETD1AO15047 1707 aaKnown RBP12.33□□□□□ -0.43
CDC42BPA-203ENST00000366766 FASP25445 335 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 TGM3Q08188 693 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 GALNT4Q8N4A0 578 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 FAM153AQ9UHL3 310 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 SLC4A7Q9Y6M7 1214 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 CAPN15O75808 1086 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 FCGRTP55899 365 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 TJAP1Q5JTD0 557 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 KCNMB4Q86W47 210 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 MICU2Q8IYU8 434 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 SHC3Q92529 594 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 FAXDC2Q96IV6 333 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 VPS50Q96JG6 964 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 C9orf16Q9BUW7 83 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZCCHC2Q9C0B9 1178 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 MYO1GB0I1T2 1018 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 ACAT1P24752 427 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 CCNG1P51959 295 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 FAM98BQ52LJ0 330 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 NOP9Q86U38 636 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 CYP4Z1Q86W10 505 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 KLF6Q99612 283 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 THUMPD3Q9BV44 507 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZBTB12Q9Y330 459 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 KDM3BQ7LBC6 1761 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 FAM58BPP0C7Q3 252 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 CASP10Q92851 521 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 CAMKK2Q96RR4 588 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 GPAMQ9HCL2 828 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 PSMC6P62333 389 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 IFNEQ86WN2 208 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 PHF13Q86YI8 300 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 STK32AQ8WU08 396 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 HSFY1Q96LI6 401 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 RPRD1AQ96P16 312 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 DNAJC16Q9Y2G8 782 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 RARAP10276 462 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZNF143P52747 638 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 NCF4Q15080 339 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 MDH1BQ5I0G3 518 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 MARC1Q5VT66 337 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 CCDC33Q8N5R6 958 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZNF75CPQ92670 426 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 TATDN2Q93075 761 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 REPS1Q96D71 796 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZNF668Q96K58 619 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 PPP1R36Q96LQ0 422 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 ABHD16BQ9H3Z7 469 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 RAD21L1Q9H4I0 556 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 RUVBL2Q9Y230 463 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 ADGRA2Q96PE1 1338 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 MAPK8P45983 427 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 TMED10P49755 219 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 C1DQ13901 141 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 MFSD5Q6N075 450 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 CKAP2Q8WWK9 683 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 TAS2R13Q9NYV9 303 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 NFIBO00712 420 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 OPLAHO14841 1288 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 BMP10O95393 424 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 PREPLQ4J6C6 727 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 TRPM5Q9NZQ8 1165 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 C2CD2Q9Y426 696 aa12.33□□□□□ -0.44
CDC42BPA-203ENST00000366766 A0A0A0MRY4 1105 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 LOC100653049A0A140TA62 436 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 KRT34O76011 436 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 PSEN1P49768 467 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 XRCC4Q13426 336 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 IRGCQ6NXR0 463 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 BLOC1S5Q8TDH9 187 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 SPATA13Q96N96 652 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZBTB39O15060 712 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 CD3EAPO15446 510 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 CYTH3O43739 400 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 KLRC4O43908 158 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 ANXA6P08133 673 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 XIAPP98170 497 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 CYP51A1Q16850 503 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 MIIPQ5JXC2 388 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 AHSPQ9NZD4 102 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 SERPINB5P36952 375 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 LRRC74BQ6ZQY2 392 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 NUP98P52948 1817 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZBTB49Q6ZSB9 765 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 LENG9Q96B70 501 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 FAM118BQ9BPY3 351 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms