RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 DHRS4L1P0CG22 281 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 RPL10AP62906 217 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 HNRNPDQ14103 355 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 HSF5Q4G112 596 aaPredicted RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 WDR49Q8IV35 697 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 HEXIM2Q96MH2 286 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 XYLT2Q9H1B5 865 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 LIN28AQ9H9Z2 209 aaKnown RBP20.25■□□□□ 0.83
TRIM58-201ENST00000366481 CDH22Q9UJ99 828 aa20.25■□□□□ 0.83
TRIM58-201ENST00000366481 MCF2LO15068 1137 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 FAM189A1O60320 539 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 RNF148Q8N7C7 305 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 NAT8LQ8N9F0 302 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 DCUN1D1Q96GG9 259 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 CPB2Q96IY4 423 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 PEBP4Q96S96 227 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 C20orf27Q9GZN8 174 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 ANLNQ9NQW6 1124 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 RAB6BQ9NRW1 208 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 CNTN6Q9UQ52 1028 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 OGTO15294 1046 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 UGT1A9O60656 530 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 TFAP2AP05549 437 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 IQCF3P0C7M6 154 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 CDK4P11802 303 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 KCNA4P22459 653 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 MCCD1P59942 119 aaPredicted RBP20.24■□□□□ 0.83
TRIM58-201ENST00000366481 UGT2A3Q6UWM9 527 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 PPP4R1Q8TF05 950 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 NKD2Q969F2 451 aaPredicted RBP20.24■□□□□ 0.83
TRIM58-201ENST00000366481 PPP1R36Q96LQ0 422 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 PRICKLE1Q96MT3 831 aaPredicted RBP20.24■□□□□ 0.83
TRIM58-201ENST00000366481 C7orf26Q96N11 449 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 UGT1A7Q9HAW7 530 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 UGT1A10Q9HAW8 530 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 UGT1A8Q9HAW9 530 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 PCDHGB4Q9UN71 923 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 PCDHGB5Q9Y5G0 923 aa20.24■□□□□ 0.83
TRIM58-201ENST00000366481 SOWAHBA6NEL2 793 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 H3BSA7 217 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 AIM2O14862 343 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 ATP9BO43861 1147 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 PEX1O43933 1283 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 NELFEP18615 380 aaKnown RBP20.23■□□□□ 0.83
TRIM58-201ENST00000366481 HDAC4P56524 1084 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 SFSWAPQ12872 951 aaKnown RBP20.23■□□□□ 0.83
TRIM58-201ENST00000366481 GK3PQ14409 553 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 TBCCQ15814 346 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 MYLK3Q32MK0 819 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 DCAF15Q66K64 600 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 KYAT3Q6YP21 454 aaKnown RBP20.23■□□□□ 0.83
TRIM58-201ENST00000366481 TTC13Q8NBP0 860 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 LZICQ8WZA0 190 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 LPIN3Q9BQK8 851 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 ZNF510Q9Y2H8 683 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 FARP1Q9Y4F1 1045 aaPredicted RBP20.23■□□□□ 0.83
TRIM58-201ENST00000366481 LOXHD1Q8IVV2 1947 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 VWA5B1Q5TIE3 1220 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 ZNF554Q86TJ5 538 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 UBR7Q8N806 425 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 NGRNQ9NPE2 291 aaKnown RBP20.23■□□□□ 0.83
TRIM58-201ENST00000366481 HEMK1Q9Y5R4 338 aaPredicted RBP20.23■□□□□ 0.83
TRIM58-201ENST00000366481 KLHL2O95198 593 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 TNNC2P02585 160 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 PCSK6P29122 969 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 PPP6R3Q5H9R7 873 aaPredicted RBP20.23■□□□□ 0.83
TRIM58-201ENST00000366481 RARS2Q5T160 578 aaKnown RBP20.23■□□□□ 0.83
TRIM58-201ENST00000366481 C6orf52Q5T4I8 152 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 OR6B2Q6IFH4 312 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 AP4B1Q9Y6B7 739 aa20.23■□□□□ 0.83
TRIM58-201ENST00000366481 CXorf49A8MYA2 514 aaPredicted RBP20.22■□□□□ 0.83
TRIM58-201ENST00000366481 DCXO43602 365 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 MRPS22P82650 360 aaKnown RBP20.22■□□□□ 0.83
TRIM58-201ENST00000366481 SLC18A2Q05940 514 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 HADHQ16836 314 aaKnown RBP20.22■□□□□ 0.83
TRIM58-201ENST00000366481 SH3D19Q5HYK7 790 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 ZNF667Q5HYK9 610 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 ATF7IP2Q5U623 682 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 DRICH1Q6PGQ1 229 aaPredicted RBP20.22■□□□□ 0.83
TRIM58-201ENST00000366481 GADL1Q6ZQY3 521 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 FBXO16Q8IX29 292 aaPredicted RBP20.22■□□□□ 0.83
TRIM58-201ENST00000366481 JADE3Q92613 823 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 ELOVL4Q9GZR5 314 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 USP18Q9UMW8 372 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 GMEB1Q9Y692 573 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 TRMUO75648 421 aaKnown RBP20.22■□□□□ 0.83
TRIM58-201ENST00000366481 KRT38O76015 456 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 KCTD21Q4G0X4 260 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 XYLT1Q86Y38 959 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 ADPGKQ9BRR6 497 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 DHRS4Q9BTZ2 278 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 COPS7BQ9H9Q2 264 aaPredicted RBP20.22■□□□□ 0.83
TRIM58-201ENST00000366481 SIX4Q9UIU6 781 aa20.22■□□□□ 0.83
TRIM58-201ENST00000366481 CPSF3Q9UKF6 684 aaKnown RBP20.22■□□□□ 0.83
TRIM58-201ENST00000366481 PIGRP01833 764 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 APRTP07741 180 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 DPYSL3Q14195 570 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 PDK1Q15118 436 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 FASTKD1Q53R41 847 aaKnown RBP20.21■□□□□ 0.83
TRIM58-201ENST00000366481 CASC4Q6P4E1 433 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms