RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 STX3Q13277 289 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 IRGCQ6NXR0 463 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 CRLF3Q8IUI8 442 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 PHTF2Q8N3S3 785 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 ADAM32Q8TC27 787 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 MRPL45Q9BRJ2 306 aaKnown RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 FDXACB1Q9BRP7 624 aaPredicted RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 DPEP3Q9H4B8 488 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 A0A088AWK7 358 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 CHADO15335 359 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 MED7O43513 233 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 LMNAP02545 664 aaKnown RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 PROCP04070 461 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 STIP1P31948 543 aaKnown RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 HDAC4P56524 1084 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 PITX1P78337 314 aaPredicted RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 CDC16Q13042 620 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 TNFAIP1Q13829 316 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 HIC1Q14526 733 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 KCNT2Q6UVM3 1135 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 TMPRSS6Q8IU80 811 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 SLC26A7Q8TE54 656 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 FNIP1Q8TF40 1166 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 SEPT1Q8WYJ6 367 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 GATA6Q92908 595 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.662e-6■■□□□ 14.1
SMC3-201ENST00000361804 IFT43Q96FT9 208 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 CNPY3Q9BT09 278 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 PPCSQ9HAB8 311 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 TAGLN3Q9UI15 199 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 EFR3BQ9Y2G0 817 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 HES2Q9Y543 173 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 AK5Q9Y6K8 562 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 CYP2F1P24903 491 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 MLH1P40692 756 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 TMEM62Q0P6H9 643 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 SLC10A6Q3KNW5 377 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 SFT2D3Q587I9 215 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 C10orf107Q8IVU9 208 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 CCDC185Q8N715 623 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 PPFIBP2Q8ND30 876 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 UNKQ9C0B0 810 aaKnown RBP10.92□□□□□ -0.66
SMC3-201ENST00000361804 KCNK4Q9NYG8 393 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 PAK5Q9P286 719 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 PCDHGB4Q9UN71 923 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 PCDHGB5Q9Y5G0 923 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 MYO15AQ9UKN7 3530 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 GOLGA8TH3BQL2 631 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 TM7SF2O76062 418 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 ENDOD1O94919 500 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 ERVK-10P10266 1014 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 VAV1P15498 845 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 NCF2P19878 526 aaPredicted RBP10.92□□□□□ -0.66
SMC3-201ENST00000361804 CPOXP36551 454 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 MBTD1Q05BQ5 628 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 DLG2Q15700 870 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 CFAP157Q5JU67 520 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 HPS6Q86YV9 775 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 KLC2Q9H0B6 622 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 ADAMTS6Q9UKP5 1117 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 B4GALT4O60513 344 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 LYNP07948 512 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 PRKCHP24723 683 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 EFNA5P52803 228 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 PDE1CQ14123 709 aaPredicted RBP10.92□□□□□ -0.66
SMC3-201ENST00000361804 CAB39LQ9H9S4 337 aa10.92□□□□□ -0.66
SMC3-201ENST00000361804 MYOCOSA0A1B0GUC4 107 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 ACKR2O00590 384 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 PAPSS1O43252 624 aaPredicted RBP10.91□□□□□ -0.66
SMC3-201ENST00000361804 NPTXRO95502 500 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 PDGFRBP09619 1106 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 SPATA31D3P0C874 917 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 LCP1P13796 627 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 MGAT1P26572 445 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 PEX2P28328 305 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 TUBB3Q13509 450 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 IER5Q5VY09 327 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 TSHZ1Q6ZSZ6 1077 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 SPATA31D4Q6ZUB0 917 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 RIOX2Q8IUF8 465 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 SPATA33Q96N06 139 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 AGAP3Q96P47 875 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 GPR20Q99678 358 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 NDE1Q9NXR1 346 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 GOLGA8QA0A0J9YX86 632 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 GOLGA8OA6NCC3 632 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 GOLGA8NF8WBI6 632 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 FGF3P11487 239 aaPredicted RBP10.91□□□□□ -0.66
SMC3-201ENST00000361804 GOT1P17174 413 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 ACTR3P61158 418 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 TEDDM1Q5T9Z0 273 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 ILDR2Q71H61 639 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 FAM131BQ86XD5 332 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 RNF148Q8N7C7 305 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 C7orf26Q96N11 449 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 WWP1Q9H0M0 922 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 NRDE2Q9H7Z3 1164 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 IFT122Q9HBG6 1241 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 TMEM216Q9P0N5 145 aa10.91□□□□□ -0.66
SMC3-201ENST00000361804 SDR42E2A6NKP2 422 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms