RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 CCHCR1Q8TD31 782 aa21.74■■□□□ 1.07
MAP1LC3A-201ENST00000360668 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.74■■□□□ 1.07
MAP1LC3A-201ENST00000360668 SFMBT1Q9UHJ3 866 aa21.74■■□□□ 1.07
MAP1LC3A-201ENST00000360668 SNX24Q9Y343 169 aa21.74■■□□□ 1.07
MAP1LC3A-201ENST00000360668 YIPF1Q9Y548 306 aa21.74■■□□□ 1.07
MAP1LC3A-201ENST00000360668 LCHNA4D1U4 455 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 I6L893 689 aaPredicted RBP21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 TEX28O15482 410 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 CSH1P0DML2 217 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 CSH2P0DML3 217 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 CCR1P32246 355 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 ELF1P32519 619 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 RPL21P46778 160 aaKnown RBP21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 HCAR3P49019 387 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 EIF3EP60228 445 aaKnown RBP21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 CCDC89Q8N998 374 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 PDZD8Q8NEN9 1154 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 FAM129AQ9BZQ8 928 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 OSBPL2Q9H1P3 480 aa21.73■■□□□ 1.07
MAP1LC3A-201ENST00000360668 PLXNA4Q9HCM2 1894 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 EEF2KO00418 725 aaKnown RBP21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 CTNNB1P35222 781 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 NR2C2P49116 596 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 C1orf228Q6PIY5 440 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 NPNTQ6UXI9 565 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 ZNF276Q8N554 614 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 HAPLN3Q96S86 360 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 CDK5RAP1Q96SZ6 601 aaKnown RBP21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 ARHGEF4Q9NR80 690 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 ASIC3Q9UHC3 531 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 TLR6Q9Y2C9 796 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 SZT2Q5T011 3432 aa21.72■■□□□ 1.07
MAP1LC3A-201ENST00000360668 SPDYE4A6NLX3 237 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 CREB3O43889 395 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 KRT14P02533 472 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 SLC2A3P11169 496 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 AMPD1P23109 780 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 KLRC2P26717 231 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 DPYSQ14117 519 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 KCTD19Q17RG1 926 aaPredicted RBP21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 SNX30Q5VWJ9 437 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 RFX8Q6ZV50 586 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 MYRFLQ96LU7 910 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 GRHL1Q9NZI5 618 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 WHRNQ9P202 907 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 NUDT5Q9UKK9 219 aa21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 MAGED2Q9UNF1 606 aaPredicted RBP21.71■■□□□ 1.07
MAP1LC3A-201ENST00000360668 PRRG1O14668 218 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 MSI1O43347 362 aaKnown RBP21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 CXCL14O95715 111 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 CNPP09543 421 aaKnown RBP21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 RBP3P10745 1247 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 HMGA1P17096 107 aaKnown RBP21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 VEPH1Q14D04 833 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 NCBP2-AS2Q69YL0 99 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TMC7Q7Z402 723 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 MREGQ8N565 214 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TRMT2BQ96GJ1 504 aaKnown RBP21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 SLC39A13Q96H72 371 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 EPAS1Q99814 870 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TMEM121Q9BTD3 319 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 ZDHHC18Q9NUE0 388 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 IRAK3Q9Y616 596 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 LAMA2P24043 3122 aaKnown RBP21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 LINC01553A4QN01 128 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 KCNU1A8MYU2 1149 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 FAM72CH0Y354 149 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 ITIH2P19823 946 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 IVDP26440 423 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TNNT3P45378 269 aaPredicted RBP21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TPI1P60174 286 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 XRCC4Q13426 336 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 FAM72AQ5TYM5 149 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 FAM72DQ6L9T8 149 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 BZW1Q7L1Q6 419 aaKnown RBP21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TADA2BQ86TJ2 420 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 FAM72BQ86X60 149 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 SNF8Q96H20 258 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 NEUROG2Q9H2A3 272 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 PCDH9Q9HC56 1237 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 OR12D3Q9UGF7 316 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 HEY1Q9Y5J3 304 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 INSL5Q9Y5Q6 135 aa21.7■■□□□ 1.06
MAP1LC3A-201ENST00000360668 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 SGK1O00141 431 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 FAM153BP0C7A2 387 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 STIP1P31948 543 aaKnown RBP21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 HTR7P34969 479 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 CA8P35219 290 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 ADCY8P40145 1251 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TBX4P57082 545 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 UBE3AQ05086 875 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TWF1Q12792 350 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 EFEMP1Q12805 493 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 CALCOCO2Q13137 446 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 PLD1Q13393 1074 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 TRIP4Q15650 581 aaPredicted RBP21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 FAM153CQ494X1 144 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 C10orf120Q5SQS8 335 aa21.69■■□□□ 1.06
MAP1LC3A-201ENST00000360668 ALS2CLQ60I27 953 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms