RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CALCOCO1Q9P1Z2 691 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 RCOR3Q9P2K3 495 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 FEZ2Q9UHY8 353 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 DMGDHQ9UI17 866 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 YIPF1Q9Y548 306 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 H3BNC9 293 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 H3BRJ5 948 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 PRRG1O14668 218 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 APOL1O14791 398 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 TTI1O43156 1089 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 IRAK2O43187 625 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 DCXO43602 365 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 LILRB3O75022 631 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 KRT37O76014 449 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 SEC24AO95486 1093 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 ECEL1O95672 775 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 IGLV3-25P01717 112 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 CSH1P0DML2 217 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 CSH2P0DML3 217 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 L1CAMP32004 1257 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 ALDH1A3P47895 512 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 CXCR3P49682 368 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 VSNL1P62760 191 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 MRPS25P82663 173 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 LMNB2Q03252 620 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 SCAPQ12770 1279 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 TAF10Q12962 218 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 GPM6BQ13491 265 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 SNX1Q13596 522 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 VEPH1Q14D04 833 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 CA9Q16790 459 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 MAP9Q49MG5 647 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 PPP6R3Q5H9R7 873 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 TTC27Q6P3X3 843 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 FBXO38Q6PIJ6 1188 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 SYDE1Q6ZW31 735 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 JAMLQ86YT9 394 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 PDZD8Q8NEN9 1154 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 ADAM32Q8TC27 787 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 GIPC2Q8TF65 315 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 HDAC7Q8WUI4 952 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 ATG4AQ8WYN0 398 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 OVCA2Q8WZ82 227 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 SLCO2A1Q92959 643 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 FAF2Q96CS3 445 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 CCDC114Q96M63 670 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 SERPINB11Q96P15 392 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 RNF157Q96PX1 679 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 KCTD15Q96SI1 283 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 LMAN2LQ9H0V9 348 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 PRDM16Q9HAZ2 1276 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 NMUR1Q9HB89 426 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 WDR6Q9NNW5 1121 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 CLIC5Q9NZA1 410 aa14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 R3HDM2Q9Y2K5 976 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 UTP11Q9Y3A2 253 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-203ENST00000359265 C5orf42Q9H799 3197 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 APOC4-APOC2K7ER74 178 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 TEX28O15482 410 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 LIASO43766 372 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 GFRA3O60609 400 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 GAS8O95995 478 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 APOC2P02655 101 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 TGM2P21980 687 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 ADRA1BP35368 520 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 PTGIRP43119 386 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 ZNF135P52742 658 aaPredicted RBP14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 DYNLT1P63172 113 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 GUCY2DQ02846 1103 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 PLD1Q13393 1074 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 MTMR3Q13615 1198 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 ANKRD20A8PQ5CZ79 823 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 BRMS1LQ5PSV4 323 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 PLPP4Q5VZY2 271 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 DRICH1Q6PGQ1 229 aaPredicted RBP14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 TCEAL8Q8IYN2 117 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 MICAL1Q8TDZ2 1067 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 RNF34Q969K3 372 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 TRIM51Q9BSJ1 452 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 WDCPQ9H6R7 721 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 EPB41L5Q9HCM4 733 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 GDF3Q9NR23 364 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 FBXW11Q9UKB1 542 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 MAGED2Q9UNF1 606 aaPredicted RBP14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 ATG2AQ2TAZ0 1938 aa14.35□□□□□ -0.11
PDLIM5-203ENST00000359265 DCHS1Q96JQ0 3298 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 C2orf71A6NGG8 1288 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 ZMYND10O75800 440 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 C1RP00736 705 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 CNPP09543 421 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 RARGP13631 454 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 ZFXP17010 805 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 CLCN6P51797 869 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 EPHB3P54753 998 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 OTUD4Q01804 1114 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 ADCY2Q08462 1091 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 TCF15Q12870 199 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 NNTQ13423 1086 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms