RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ITIH2P19823 946 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 SLC25A52Q3SY17 297 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 CCDC38Q502W7 563 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 EFHC1Q5JVL4 640 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 DARS2Q6PI48 645 aaKnown RBP13.1□□□□□ -0.31
GGPS1-202ENST00000358966 DCLRE1AQ6PJP8 1040 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 ABI1Q8IZP0 508 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 ACBD6Q9BR61 282 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 NRDE2Q9H7Z3 1164 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 DNAAF2Q9NVR5 837 aaKnown RBP13.1□□□□□ -0.31
GGPS1-202ENST00000358966 C15orf41Q9Y2V0 281 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.1□□□□□ -0.31
GGPS1-202ENST00000358966 SMIM24O75264 130 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 ITGAVP06756 1048 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 MYZAPP0CAP1 466 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 RBL1P28749 1068 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 CTCFP49711 727 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 BASP1P80723 227 aaKnown RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 DDR2Q16832 855 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 PLEKHG4Q58EX7 1191 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 FAM171BQ6P995 826 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 ATAD1Q8NBU5 361 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 FAM193BQ96PV7 902 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 CSPG4P5Q96PW8 444 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 IQCGQ9H095 443 aaKnown RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 TMBIM4Q9HC24 238 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 PTPRDP23468 1912 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 EOMESO95936 686 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 ZBED1O96006 694 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 GRIK1P39086 918 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 TLE2Q04725 743 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 NOMO1Q15155 1222 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 FAM171A1Q5VUB5 890 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 ANKMY2Q8IV38 441 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 MRRFQ96E11 262 aaKnown RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 ZNF570Q96NI8 536 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 RBM15Q96T37 977 aaKnown RBP eCLIP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 NPY6RQ99463 290 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 BEGAINQ9BUH8 593 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 NOVA2Q9UNW9 492 aaKnown RBP13.09□□□□□ -0.31
GGPS1-202ENST00000358966 REV3LO60673 3130 aa13.09□□□□□ -0.31
GGPS1-202ENST00000358966 DNALI1O14645 258 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-202ENST00000358966 APOL1O14791 398 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 MDM4O15151 490 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 KCNN4O15554 427 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 MSI1O43347 362 aaKnown RBP13.08□□□□□ -0.32
GGPS1-202ENST00000358966 TADA2AO75478 443 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 DAB1O75553 588 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 TMEM63AO94886 807 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 CYP11A1P05108 521 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 NUMBP49757 651 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 SNX16P57768 344 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 FAM189BP81408 668 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 DEUP1Q05D60 604 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 DRICH1Q6PGQ1 229 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-202ENST00000358966 RSPO2Q6UXX9 243 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-202ENST00000358966 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 URGCPQ8TCY9 931 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 BCL7CQ8WUZ0 217 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-202ENST00000358966 ATP6V1G3Q96LB4 118 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 NOD2Q9HC29 1040 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 UBN1Q9NPG3 1134 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 BAIAP2L1Q9UHR4 511 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 PCDHB7Q9Y5E2 793 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 SQORQ9Y6N5 450 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 CHD9Q3L8U1 2897 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 GOLGA8KD6RF30 607 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 ANP32DO95626 131 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 LTFP02788 710 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 SKIP12755 728 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 RARGP13631 454 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 SLC5A3P53794 718 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 IFI35P80217 286 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-202ENST00000358966 ROR1Q01973 937 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 GUCY1A3Q02108 690 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 FAAP100Q0VG06 881 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 DPYSL2Q16555 572 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 CCDC121Q6ZUS5 278 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 CCDC110Q8TBZ0 833 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 ZNF473Q8WTR7 871 aaKnown RBP13.08□□□□□ -0.32
GGPS1-202ENST00000358966 CPT1BQ92523 772 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 ACTR5Q9H9F9 607 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-202ENST00000358966 SAYSD1Q9NPB0 183 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 TMEM161AQ9NX61 479 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms