RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SYTL3Q4VX76 610 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 LRRC38Q5VT99 294 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 ISLR2Q6UXK2 745 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 RNF19AQ9NV58 838 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 DCCP43146 1447 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 C17orf102A2RUQ5 167 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 TBC1D12O60347 775 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 VPS26AO75436 327 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 ENDOD1O94919 500 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 GLRA2P23416 452 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 S100A5P33763 92 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 PLK1P53350 603 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 HYIQ5T013 277 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 TIGD7Q6NT04 549 aaPredicted RBP14.07□□□□□ -0.16
VCP-201ENST00000358901 PYDC1Q8WXC3 89 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 ZNF184Q99676 751 aaPredicted RBP14.07□□□□□ -0.16
VCP-201ENST00000358901 APBA2Q99767 749 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 PIF1Q9H611 641 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 ZNF556Q9HAH1 456 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 DDX43Q9NXZ2 648 aaKnown RBP14.07□□□□□ -0.16
VCP-201ENST00000358901 PAIP2BQ9ULR5 123 aaKnown RBP14.07□□□□□ -0.16
VCP-201ENST00000358901 AP4S1Q9Y587 144 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 MRPL42Q9Y6G3 142 aaKnown RBP14.07□□□□□ -0.16
VCP-201ENST00000358901 C5orf58C9J3I9 102 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 TRDMT1O14717 391 aaKnown RBP14.07□□□□□ -0.16
VCP-201ENST00000358901 SMNDC1O75940 238 aaKnown RBP eCLIP14.07□□□□□ -0.162e-7■■■■□ 23.2
VCP-201ENST00000358901 RAG1P15918 1043 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 THPOP40225 353 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 CPT1AP50416 773 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 NOMO3P69849 1222 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 SLC20A2Q08357 652 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 PIWIL2Q8TC59 973 aaKnown RBP14.07□□□□□ -0.16
VCP-201ENST00000358901 LRRC39Q96DD0 335 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 GOLGA4Q13439 2230 aaKnown RBP14.07□□□□□ -0.16
VCP-201ENST00000358901 MAGEB16A2A368 324 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 HEATR9A2RTY3 570 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 SAC3D1A6NKF1 404 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 CFAP99D6REC4 459 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 SERPIND1P05546 499 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PGAM1P18669 254 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 NR2C2P49116 596 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 BST1Q10588 318 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 EFEMP1Q12805 493 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 MMRN1Q13201 1228 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 CCDC153Q494R4 210 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 C15orf52Q6ZUT6 534 aaKnown RBP14.06□□□□□ -0.16
VCP-201ENST00000358901 HORMAD1Q86X24 394 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 ALLCQ8N6M5 410 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 FOPNLQ96NB1 174 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PCDHB18PQ96TA0 734 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 SYT15Q9BQS2 421 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 KCNK4Q9NYG8 393 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PPP1R11O60927 126 aaPredicted RBP14.06□□□□□ -0.16
VCP-201ENST00000358901 ERVK-10P10266 1014 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 CCR1P32246 355 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PPP3CCP48454 512 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 ARHGEF7Q14155 803 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 SNX17Q15036 470 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 RNF43Q68DV7 783 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 ZNF470Q6ECI4 717 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 CRELD2Q6UXH1 353 aaPredicted RBP14.06□□□□□ -0.16
VCP-201ENST00000358901 POLNQ7Z5Q5 900 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 VPS37AQ8NEZ2 397 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 TTYH3Q9C0H2 523 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 SPDYE5A6NIY4 337 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PHGDHO43175 533 aaKnown RBP14.06□□□□□ -0.16
VCP-201ENST00000358901 TSPAN3O60637 253 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PSMG1O95456 288 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 ADRM1Q16186 407 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 SPDYE7PQ495Y7 208 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 GRTP1Q5TC63 336 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 IRGCQ6NXR0 463 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
VCP-201ENST00000358901 ADCK2Q7Z695 626 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 FBXO32Q969P5 355 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 NMRAL1Q9HBL8 299 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 ETNK2Q9NVF9 386 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PNMA8BQ9ULN7 279 aaPredicted RBP14.06□□□□□ -0.16
VCP-201ENST00000358901 UBIAD1Q9Y5Z9 338 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 CASTOR2A6NHX0 329 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 DCDC2CA8MYV0 355 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 ME2P23368 584 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 NAGLUP54802 743 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 NUP107P57740 925 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PALB2Q86YC2 1186 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 KREMEN1Q96MU8 473 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 TMEM79Q9BSE2 394 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 PTPRHQ9HD43 1115 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 CCDC167Q9P0B6 97 aa14.06□□□□□ -0.16
VCP-201ENST00000358901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 STRNO43815 780 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 LHX1P48742 406 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 ZNF177Q13360 481 aaPredicted RBP14.05□□□□□ -0.16
VCP-201ENST00000358901 TRIM60Q495X7 471 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 TBCELQ5QJ74 424 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 CYP2R1Q6VVX0 501 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 BBS12Q6ZW61 710 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 TFAP2DQ7Z6R9 452 aa14.05□□□□□ -0.16
VCP-201ENST00000358901 NEUROG2Q9H2A3 272 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms